| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Azospirillum brasilense Sp245 | 1.0 | AZOBR_RS20390 | | hydrogenase 2 large subunit | 1.0 | AZOBR_RS04270 | | RNA methyltransferase | 0.27 | 20 |
| Magnetospirillum magneticum AMB-1 | 0.69 | AMB_RS08335 | | nickel-dependent hydrogenase large subunit | 0.50 | AMB_RS10750 | | RNA methyltransferase | low | > 64 |
| Dechlorosoma suillum PS | 0.68 | Dsui_3009 | | Ni,Fe-hydrogenase I large subunit | 0.21 | Dsui_2367 | | RNA methyltransferase, TrmH family, group 1 | low | > 51 |
| Escherichia coli Nissle 1917 | 0.59 | ECOLIN_RS17250 | | hydrogenase 2 large subunit | 0.22 | ECOLIN_RS14375 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Escherichia fergusonii Becca | 0.59 | EFB2_00813 | | Hydrogenase-2 large chain | 0.22 | EFB2_01358 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ | low | > 86 |
| Escherichia coli ECRC102 | 0.59 | NIAGMN_16785 | hybC | hydrogenase 2 large subunit | 0.22 | NIAGMN_19380 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.59 | OHPLBJKB_00705 | | Hydrogenase-2 large chain | 0.22 | OHPLBJKB_01177 | | 'tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ' transl_table=11 | low | > 73 |
| Escherichia coli ECRC101 | 0.59 | MCAODC_09535 | hybC | hydrogenase 2 large subunit | 0.22 | MCAODC_12140 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 87 |
| Escherichia coli ECRC99 | 0.59 | KEDOAH_09125 | hybC | hydrogenase 2 large subunit | 0.22 | KEDOAH_06610 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | — | — |
| Escherichia coli ECRC62 | 0.59 | BNILDI_00720 | hybC | hydrogenase 2 large subunit | 0.22 | BNILDI_12080 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 75 |
| Escherichia coli ECOR38 | 0.59 | HEPCGN_17880 | hybC | hydrogenase 2 large subunit | 0.22 | HEPCGN_20750 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 87 |
| Escherichia coli BL21 | 0.59 | ECD_02870 | | hydrogenase 2, large subunit | 0.22 | ECD_02424 | | tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent | low | > 61 |
| Escherichia coli BW25113 | 0.59 | b2994 | hybC | hydrogenase 2, large subunit (NCBI) | 0.22 | b2532 | yfhQ | predicted methyltransferase (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.59 | OKFHMN_19020 | hybC | hydrogenase 2 large subunit | 0.22 | OKFHMN_21610 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 80 |
| Escherichia coli ECRC98 | 0.59 | JDDGAC_22655 | hybC | hydrogenase 2 large subunit | 0.22 | JDDGAC_25285 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 86 |
| Escherichia coli ECOR27 | 0.59 | NOLOHH_10795 | hybC | hydrogenase 2 large subunit | 0.22 | NOLOHH_13280 | trmJ | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF3105 | | Uptake hydrogenase large subunit (EC 1.12.99.6) | 0.22 | GFF2437 | | tRNA:Cm32/Um32 methyltransferase | low | > 78 |
| Dickeya dianthicola 67-19 | 0.58 | HGI48_RS14215 | | hydrogenase 2 large subunit | 0.21 | HGI48_RS15655 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 71 |
| Dickeya dianthicola ME23 | 0.58 | DZA65_RS14890 | | hydrogenase 2 large subunit | 0.21 | DZA65_RS16730 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 75 |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS14240 | | hydrogenase 2 large subunit | 0.21 | DDA3937_RS15555 | | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | low | > 74 |
| Rhodospirillum rubrum S1H | 0.45 | Rru_A1162 | | Nickel-dependent hydrogenase, large subunit (NCBI) | 0.56 | Rru_A0696 | | RNA methyltransferase TrmH, group 1 (NCBI) | low | > 58 |
| Alteromonas macleodii MIT1002 | 0.43 | MIT1002_00275 | | Hydrogenase-1 large chain | 0.21 | MIT1002_02806 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ | low | > 70 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.42 | DVU1922 | hynA-1 | periplasmic [NiFe] hydrogenase, large subunit, isozyme 1 (TIGR) | 0.22 | DVU2737 | | RNA methyltransferase, TrmH family (TIGR) | low | > 55 |
| Azospirillum sp. SherDot2 | 0.41 | MPMX19_05287 | | Uptake hydrogenase large subunit | 0.79 | MPMX19_02031 | | tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ | low | > 112 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF2229 | | Uptake hydrogenase large subunit (EC 1.12.99.6) | 0.19 | GFF3650 | | tRNA:Cm32/Um32 methyltransferase | — | — |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS13680 | | nickel-dependent hydrogenase large subunit | 0.19 | ABID97_RS20730 | | RNA methyltransferase | low | > 91 |
| Shewanella amazonensis SB2B | 0.39 | Sama_1678 | | hydrogenase large chain (RefSeq) | 0.21 | Sama_1290 | | RNA methyltransferase (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.39 | SO2098 | hyaB | quinone-reactive Ni/Fe hydrogenase, large subunit (NCBI ptt file) | 0.22 | SO2261 | | RNA methyltransferase, TrmH family, group 1 (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_1879 | | nickel-dependent hydrogenase, large subunit (RefSeq) | 0.23 | Shewana3_2283 | | RNA methyltransferase (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.37 | Shew_1764 | | nickel-dependent hydrogenase, large subunit (RefSeq) | 0.23 | Shew_2320 | | RNA methyltransferase (RefSeq) | low | > 60 |
Not shown: 2 genomes with orthologs for AZOBR_RS20390 only; 58 genomes with orthologs for AZOBR_RS04270 only