| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Shewanella amazonensis SB2B | 1.0 | Sama_2069 | | MarR family transcriptional regulator (RefSeq) | 1.0 | Sama_1044 | | RNA polymerase sigma-38 factor (RefSeq) | 0.53 | 8 |
| Shewanella sp. ANA-3 | 0.83 | Shewana3_1739 | | MarR family transcriptional regulator (RefSeq) | 0.87 | Shewana3_1124 | | RNA polymerase, sigma 38 subunit, RpoS (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.82 | SO2640 | | transcriptional regulator, MarR family (NCBI ptt file) | 0.87 | SO3432 | rpoS | RNA polymerase sigma-38 factor (NCBI ptt file) | 0.55 | 5 |
| Shewanella loihica PV-4 | 0.78 | Shew_1552 | | MarR family transcriptional regulator (RefSeq) | 0.85 | Shew_1213 | | RpoD family RNA polymerase sigma factor (RefSeq) | — | — |
| Variovorax sp. SCN45 | 0.24 | GFF4768 | | Transcriptional regulator, MarR family | 0.34 | GFF2842 | | RNA polymerase sigma factor RpoS | low | > 127 |
| Pseudomonas fluorescens GW456-L13 | 0.22 | PfGW456L13_3467 | | Transcriptional regulator, MarR family | 0.62 | PfGW456L13_4674 | | RNA polymerase sigma factor RpoS | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.22 | AO353_18435 | | MarR family transcriptional regulator | 0.62 | AO353_16615 | | RNA polymerase sigma factor RpoS | low | > 101 |
| Pseudomonas putida KT2440 | 0.22 | PP_4515 | | Transcriptional regulator, MarR family | 0.63 | PP_1623 | | RNA polymerase, sigma S (sigma 38) factor | low | > 96 |
| Pseudomonas simiae WCS417 | 0.21 | PS417_19945 | | MarR family transcriptional regulator | 0.63 | PS417_06365 | | RNA polymerase sigma factor | low | > 88 |
| Marinobacter adhaerens HP15 | 0.21 | HP15_3821 | | transcriptional regulator, MarR family | 0.60 | HP15_1283 | | RNA polymerase, sigma 70 subunit, RpoD family | low | > 73 |
| Pseudomonas sp. RS175 | 0.21 | PFR28_00789 | | Transcriptional regulator SlyA | 0.62 | PFR28_00427 | | RNA polymerase sigma factor RpoS | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.21 | PFLU_RS21915 | | MarR family transcriptional regulator | 0.63 | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.21 | PFLU_RS21915 | | MarR family transcriptional regulator | 0.63 | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.21 | AO356_04045 | | MarR family transcriptional regulator | 0.62 | AO356_05885 | | RNA polymerase sigma factor RpoS | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_2644 | | Transcriptional regulator SlyA | 0.62 | Pf6N2E2_3037 | | RNA polymerase sigma factor RpoS | — | — |
| Escherichia fergusonii Becca | 0.20 | EFB2_02350 | | Transcriptional regulator SlyA | 0.70 | EFB2_01169 | | RNA polymerase sigma factor RpoS | low | > 86 |
| Escherichia coli ECOR38 | 0.20 | HEPCGN_05860 | slyA | transcriptional regulator SlyA | 0.70 | HEPCGN_19675 | rpoS | RNA polymerase sigma factor RpoS | low | > 87 |
| Escherichia coli ECRC101 | 0.19 | MCAODC_17935 | slyA | transcriptional regulator SlyA | 0.70 | MCAODC_11020 | rpoS | RNA polymerase sigma factor RpoS | low | > 87 |
| Escherichia coli ECRC62 | 0.19 | BNILDI_16785 | slyA | transcriptional regulator SlyA | 0.70 | BNILDI_10860 | rpoS | RNA polymerase sigma factor RpoS | low | > 75 |
| Escherichia coli ECOR27 | 0.19 | NOLOHH_17995 | slyA | transcriptional regulator SlyA | 0.70 | NOLOHH_12310 | rpoS | RNA polymerase sigma factor RpoS | — | — |
| Escherichia coli ECRC100 | 0.19 | OKFHMN_27475 | slyA | transcriptional regulator SlyA | 0.70 | OKFHMN_20495 | rpoS | RNA polymerase sigma factor RpoS | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.19 | OHPLBJKB_02083 | | Transcriptional regulator SlyA | 0.70 | OHPLBJKB_00992 | | RNA polymerase sigma factor RpoS | low | > 73 |
| Escherichia coli ECRC98 | 0.19 | JDDGAC_02065 | slyA | transcriptional regulator SlyA | 0.70 | JDDGAC_24160 | rpoS | RNA polymerase sigma factor RpoS | low | > 86 |
| Escherichia coli BL21 | 0.19 | ECD_01612 | | global transcriptional regulator | 0.70 | ECD_02591 | | RNA polymerase, sigma S (sigma 38) factor | — | — |
| Escherichia coli ECRC102 | 0.19 | NIAGMN_00590 | slyA | transcriptional regulator SlyA | 0.70 | NIAGMN_18265 | rpoS | RNA polymerase sigma factor RpoS | — | — |
| Escherichia coli BW25113 | 0.19 | b1642 | slyA | transcriptional regulator for cryptic hemolysin (VIMSS) | 0.70 | b2741 | rpoS | RNA polymerase sigma factor (NCBI) | 0.21 | 37 |
| Pseudomonas sp. S08-1 | 0.18 | OH686_20685 | | Transcriptional regulator SlyA | 0.63 | OH686_18185 | | RNA polymerase sigma factor RpoS | — | — |
Not shown: 18 genomes with orthologs for Sama_2069 only; 23 genomes with orthologs for Sama_1044 only