Conservation of cofitness between Sama_0887 and Sama_0168 in Shewanella amazonensis SB2B

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0887 hypothetical protein (RefSeq) 1.0 Sama_0168 general secretion pathway protein C (RefSeq) 0.41 13
Shewanella sp. ANA-3 0.85 Shewana3_3019 cytochrome c assembly protein (RefSeq) 0.65 Shewana3_0150 general secretion pathway protein C (RefSeq) low > 73
Shewanella oneidensis MR-1 0.84 SO1355 membrane protein, putative (NCBI ptt file) 0.66 SO0165 gspC general secretion pathway protein C (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.80 Shew_1061 cytochrome c assembly protein (RefSeq) 0.58 Shew_3620 general secretion pathway protein C (RefSeq) — —
Klebsiella pneumoniae MKP103 0.39 KDGMDA_02230 Cytochrome C assembly protein 0.21 KDGMDA_13350 type II secretion system protein GspC low > 95
Escherichia coli BL21 0.37 ECD_02500 cytochrome c assembly protein family inner membrane protein 0.18 ECD_02839 putative secretion pathway protein, C-type protein low > 61
Escherichia coli Nissle 1917 0.37 ECOLIN_RS14755 inner membrane protein YpjD 0.17 ECOLIN_RS17090 type II secretion system protein GspC low > 55
Escherichia coli ECOR27 0.37 NOLOHH_12840 ypjD Inner membrane protein YpjD 0.17 NOLOHH_10970 gspC type II secretion system protein GspC low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_01095 Inner membrane protein YpjD 0.17 OHPLBJKB_00738 Type II secretion system protein C low > 74
Escherichia coli ECOR38 0.37 HEPCGN_20285 ypjD Inner membrane protein YpjD 0.17 HEPCGN_18045 gspC type II secretion system protein GspC low > 88
Escherichia fergusonii Becca 0.37 EFB2_01281 Inner membrane protein YpjD 0.17 EFB2_00844 Type II secretion system protein C 2 low > 86
Klebsiella michiganensis M5al 0.37 BWI76_RS21535 inner membrane protein YpjD 0.21 BWI76_RS05095 pullulanase low > 92
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_02985 inner membrane protein YpjD 0.28 CSW01_13795 type II secretion system protein GspC low > 62
Rahnella sp. WP5 0.37 EX31_RS07735 inner membrane protein YpjD 0.12 EX31_RS16160 type II secretion system protein GspC low > 89
Alteromonas macleodii MIT1002 0.35 MIT1002_01295 Inner membrane protein YpjD 0.32 MIT1002_03975 General secretion pathway protein C low > 70
Pectobacterium carotovorum WPP14 0.34 HER17_RS05105 inner membrane protein YpjD 0.20 HER17_RS06680 type II secretion system protein GspC low > 75
Dickeya dianthicola 67-19 0.32 HGI48_RS16295 inner membrane protein YpjD 0.16 HGI48_RS14740 type II secretion system protein GspC low > 71
Dickeya dianthicola ME23 0.32 DZA65_RS17390 inner membrane protein YpjD 0.16 DZA65_RS15685 type II secretion system protein GspC low > 75
Dickeya dadantii 3937 0.32 DDA3937_RS16185 inner membrane protein YpjD 0.16 DDA3937_RS14805 type II secretion system protein GspC low > 74
Marinobacter adhaerens HP15 0.22 HP15_756 cytochrome c assembly protein 0.09 HP15_2356 general secretion pathway protein C low > 73
Acinetobacter radioresistens SK82 0.21 MPMX26_02469 Inner membrane protein YpjD 0.09 MPMX26_00195 hypothetical protein low > 36
Kangiella aquimarina DSM 16071 0.17 B158DRAFT_2259 ABC-type uncharacterized transport system, permease component 0.17 B158DRAFT_0688 type II secretion system protein C (GspC) low > 40

Not shown: 49 genomes with orthologs for Sama_0887 only; 0 genomes with orthologs for Sama_0168 only