Conservation of cofitness between Sama_1282 and Sama_0022 in Shewanella amazonensis SB2B

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_1282 signal transduction histidine kinase, LytS (RefSeq) 1.0 Sama_0022 Urea carboxylase (RefSeq) 0.57 13
Shewanella loihica PV-4 0.71 Shew_2328 signal transduction histidine kinase, LytS (RefSeq) 0.45 Shew_0007 urea amidolyase related protein (RefSeq) low > 60
Azospirillum sp. SherDot2 0.59 MPMX19_06240 Sensor histidine kinase BtsS 0.29 MPMX19_04957 5-oxoprolinase subunit C low > 112
Pectobacterium carotovorum WPP14 0.59 HER17_RS01480 sensor histidine kinase 0.45 HER17_RS14980 biotin-dependent carboxyltransferase family protein low > 75
Serratia liquefaciens MT49 0.59 IAI46_23620 sensor histidine kinase 0.45 IAI46_06220 biotin-dependent carboxyltransferase family protein low > 86
Rhodospirillum rubrum S1H 0.58 Rru_A0377 Signal Transduction Histidine Kinase (STHK), LytS (NCBI) 0.22 Rru_A1505 Allophanate hydrolase subunit 2 (NCBI) low > 58
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_03630 sensor histidine kinase 0.33 CSW01_18065 allophanate hydrolase low > 62
Escherichia coli BW25113 0.57 b2126 yehU predicted sensory kinase in two-component system with YehT (NCBI) 0.46 b0712 ybgK predicted enzyme subunit (NCBI) low > 76
Escherichia coli ECOR27 0.57 NOLOHH_15230 btsS two-component regulatory system sensor histidine kinase BtsS 0.46 NOLOHH_23385 pxpC 5-oxoprolinase subunit PxpC low > 76
Escherichia fergusonii Becca 0.57 EFB2_01730 Sensor histidine kinase BtsS 0.45 EFB2_03391 5-oxoprolinase subunit C low > 86
Escherichia coli ECRC62 0.57 BNILDI_14180 btsS two-component regulatory system sensor histidine kinase BtsS 0.46 BNILDI_21380 pxpC 5-oxoprolinase subunit PxpC low > 75
Escherichia coli Nissle 1917 0.57 ECOLIN_RS12455 two-component regulatory system sensor histidine kinase BtsS 0.45 ECOLIN_RS03810 5-oxoprolinase subunit PxpC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_01585 Sensor histidine kinase BtsS 0.46 OHPLBJKB_03005 putative protein YbgK low > 74
Escherichia coli BL21 0.57 ECD_02055 inner membrane putative sensory kinase in two-component system with YehT 0.46 ECD_00672 putative allophanate hydrolase, subunit 2 low > 61
Escherichia coli ECOR38 0.57 HEPCGN_02635 btsS two-component regulatory system sensor histidine kinase BtsS 0.46 HEPCGN_01210 pxpC 5-oxoprolinase subunit PxpC low > 88
Escherichia coli ECRC100 0.57 OKFHMN_23910 btsS two-component regulatory system sensor histidine kinase BtsS 0.46 OKFHMN_07000 pxpC 5-oxoprolinase subunit PxpC low > 79
Escherichia coli ECRC98 0.57 JDDGAC_28000 btsS two-component regulatory system sensor histidine kinase BtsS 0.46 JDDGAC_10655 pxpC 5-oxoprolinase subunit PxpC low > 87
Escherichia coli ECRC101 0.57 MCAODC_21250 btsS two-component regulatory system sensor histidine kinase BtsS 0.46 MCAODC_26220 pxpC 5-oxoprolinase subunit PxpC low > 88
Escherichia coli ECRC102 0.57 NIAGMN_21845 btsS two-component regulatory system sensor histidine kinase BtsS 0.46 NIAGMN_05055 pxpC 5-oxoprolinase subunit PxpC low > 80
Escherichia coli ECRC99 0.57 KEDOAH_04255 btsS two-component regulatory system sensor histidine kinase BtsS 0.46 KEDOAH_20965 pxpC 5-oxoprolinase subunit PxpC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF3819 Autolysis histidine kinase LytS 0.45 GFF4617 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) low > 78
Dickeya dadantii 3937 0.56 DDA3937_RS16370 sensor histidine kinase 0.44 DDA3937_RS06420 biotin-dependent carboxyltransferase family protein low > 74
Dickeya dianthicola 67-19 0.56 HGI48_RS19860 sensor histidine kinase 0.44 HGI48_RS06465 biotin-dependent carboxyltransferase family protein low > 71
Dickeya dianthicola ME23 0.55 DZA65_RS20935 sensor histidine kinase 0.44 DZA65_RS06810 biotin-dependent carboxyltransferase family protein low > 75
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0436 Putative regulator of cell autolysis 0.43 EX28DRAFT_2275 biotin-dependent carboxylase uncharacterized domain low > 76
Klebsiella pneumoniae MKP103 0.54 KDGMDA_26490 sensor histidine kinase 0.43 KDGMDA_16675 Carboxyltransferase domain subdomain A and B low > 95
Enterobacter sp. TBS_079 0.54 MPMX20_03093 Sensor histidine kinase BtsS 0.43 MPMX20_01346 5-oxoprolinase subunit C low > 85
Klebsiella michiganensis M5al 0.54 BWI76_RS19475 signal transduction histidine kinase 0.47 BWI76_RS08355 hypothetical protein low > 92
Alteromonas macleodii MIT1002 0.53 MIT1002_01190 Sensor histidine kinase YehU 0.24 MIT1002_02296 KipI antagonist low > 70
Rahnella sp. WP5 0.53 EX31_RS00775 sensor histidine kinase 0.43 EX31_RS23390 biotin-dependent carboxyltransferase family protein low > 89
Erwinia amylovora T8 0.51 OLJFJH_08010 sensor histidine kinase 0.43 OLJFJH_17000 Carboxyltransferase domain subdomain A and B low > 58
Erwinia tracheiphila SCR3 0.48 LU632_RS20435 sensor histidine kinase 0.42 LU632_RS16140 biotin-dependent carboxyltransferase family protein low > 74
Pantoea sp. MT58 0.21 IAI47_05565 sensor histidine kinase 0.44 IAI47_13800 biotin-dependent carboxyltransferase family protein low > 76
Pantoea agglomerans CFBP13505 P0401 0.20 PagCFBP13505_RS20115 sensor histidine kinase 0.44 PagCFBP13505_RS03505 biotin-dependent carboxyltransferase family protein low > 74
Fusobacterium nucleatum SB010 0.19 HUW76_02605 sensor histidine kinase 0.32 HUW76_07950 biotin-dependent carboxyltransferase family protein low > 35

Not shown: 5 genomes with orthologs for Sama_1282 only; 47 genomes with orthologs for Sama_0022 only