Conservation of cofitness between Shew_1150 and Shew_2897 in Shewanella loihica PV-4

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_1150 transmembrane pair domain-containing protein (RefSeq) 1.0 Shew_2897 LysR family transcriptional regulator (RefSeq) 0.40 9
Pectobacterium carotovorum WPP14 0.43 HER17_RS17110 multidrug/biocide efflux PACE transporter 0.25 HER17_RS01040 HTH-type transcriptional regulator HdfR low > 75
Dickeya dianthicola 67-19 0.41 HGI48_RS04510 multidrug/biocide efflux PACE transporter 0.25 HGI48_RS20335 HTH-type transcriptional regulator HdfR low > 71
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2925 Predicted membrane protein 0.24 EX28DRAFT_4436 Transcriptional regulator low > 76
Dickeya dianthicola ME23 0.40 DZA65_RS04430 multidrug/biocide efflux PACE transporter 0.25 DZA65_RS21375 HTH-type transcriptional regulator HdfR low > 75
Enterobacter sp. TBS_079 0.39 MPMX20_03721 hypothetical protein 0.24 MPMX20_04505 HTH-type transcriptional regulator HdfR low > 85
Dickeya dadantii 3937 0.39 DDA3937_RS04550 multidrug/biocide efflux PACE transporter 0.25 DDA3937_RS20190 HTH-type transcriptional regulator HdfR low > 74
Pantoea sp. MT58 0.39 IAI47_14420 multidrug/biocide efflux PACE transporter 0.25 IAI47_01000 HTH-type transcriptional regulator HdfR low > 76
Serratia liquefaciens MT49 0.39 IAI46_18230 multidrug/biocide efflux PACE transporter 0.25 IAI46_24385 HTH-type transcriptional regulator HdfR low > 86
Rahnella sp. WP5 0.38 EX31_RS20050 multidrug/biocide efflux PACE transporter 0.26 EX31_RS14970 HTH-type transcriptional regulator HdfR low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF1332 FIG01045951: hypothetical protein 0.23 GFF2907 HTH-type transcriptional regulator hdfR low > 78
Pseudomonas putida KT2440 0.36 PP_3512 conserved membrane protein of unknown function 0.20 PP_2350 LysR family transcriptional regulator low > 96
Klebsiella michiganensis M5al 0.36 BWI76_RS23455 Na(+)-translocating NADH-quinone reductase subunit E 0.24 BWI76_RS00940 transcriptional regulator HdfR low > 92
Pseudomonas simiae WCS417 0.35 PS417_21930 membrane protein 0.21 PS417_17700 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_03190 hypothetical protein 0.21 AO353_22745 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1938 FIG00961830: hypothetical protein 0.22 PfGW456L13_2837 HTH-type transcriptional regulator hdfR low > 87
Sinorhizobium meliloti 1021 0.32 SMa1780 hypothetical protein 0.20 SMc02596 transcriptional regulator low > 103
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_92 hypothetical protein 0.20 Pf6N2E2_2079 HTH-type transcriptional regulator hdfR low > 103
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_21560 hypothetical protein 0.20 AO356_00585 LysR family transcriptional regulator low > 104
Variovorax sp. OAS795 0.26 ABID97_RS03465 PACE efflux transporter 0.21 ABID97_RS24430 LysR family transcriptional regulator low > 91

Not shown: 17 genomes with orthologs for Shew_1150 only; 25 genomes with orthologs for Shew_2897 only