Conservation of cofitness between Shew_2455 and Shew_0316 in Shewanella loihica PV-4

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2455 peptidase M23B (RefSeq) 1.0 Shew_0316 protein of unknown function DUF513, hemX (RefSeq) 0.46 14
Shewanella sp. ANA-3 0.68 Shewana3_2610 peptidase M23B (RefSeq) 0.41 Shewana3_0384 protein of unknown function DUF513, hemX (RefSeq) — —
Shewanella oneidensis MR-1 0.68 SO2842 peptidase, M23/M37 family (NCBI ptt file) 0.41 SO4315 hemX hemX protein (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.66 Sama_1269 M24/M37 family peptidase (RefSeq) 0.37 Sama_3256 hemX protein (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_14420 peptidase M23 0.20 CSW01_00600 heme biosynthesis operon protein HemX low > 62
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS02350 murein DD-endopeptidase MepM 0.21 PagCFBP13505_RS15415 uroporphyrinogen-III C-methyltransferase low > 74
Pantoea sp. MT58 0.30 IAI47_08470 murein DD-endopeptidase MepM 0.21 IAI47_18435 uroporphyrinogen-III C-methyltransferase low > 76
Rahnella sp. WP5 0.29 EX31_RS10670 murein DD-endopeptidase MepM 0.21 EX31_RS15135 uroporphyrinogen-III C-methyltransferase low > 89
Serratia liquefaciens MT49 0.28 IAI46_14600 murein DD-endopeptidase MepM 0.23 IAI46_00685 uroporphyrinogen-III C-methyltransferase low > 86
Erwinia amylovora T8 0.28 OLJFJH_12880 murein DD-endopeptidase MepM 0.22 OLJFJH_06380 uroporphyrinogen-III C-methyltransferase low > 58
Escherichia coli BW25113 0.27 b1856 yebA orf, hypothetical protein (VIMSS) 0.20 b3803 hemX predicted uroporphyrinogen III methylase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_01872 Murein DD-endopeptidase MepM 0.20 OHPLBJKB_04250 Protein HemX low > 74
Enterobacter asburiae PDN3 0.26 EX28DRAFT_0700 Membrane proteins related to metalloendopeptidases 0.20 EX28DRAFT_4472 Uncharacterized enzyme of heme biosynthesis low > 76
Enterobacter sp. TBS_079 0.26 MPMX20_02761 Murein DD-endopeptidase MepM 0.20 MPMX20_04472 Protein HemX low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF1635 Cell wall endopeptidase, family M23/M37 0.18 GFF227 Homolog of E. coli HemX protein 0.67 47
Klebsiella michiganensis M5al 0.26 BWI76_RS18125 murein DD-endopeptidase MepM 0.18 BWI76_RS01170 uroporphyrinogen-III C-methyltransferase low > 92
Klebsiella pneumoniae MKP103 0.26 KDGMDA_25390 murein DD-endopeptidase MepM 0.20 KDGMDA_09660 uroporphyrinogen-III C-methyltransferase low > 95

Not shown: 12 genomes with orthologs for Shew_2455 only; 8 genomes with orthologs for Shew_0316 only