Conservation of cofitness between BT4409 and BT2237 in Bacteroides thetaiotaomicron VPI-5482

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT4409 DNA damage-inducible protein (NCBI ptt file) 1.0 BT2237 conserved hypothetical protein (NCBI ptt file) 0.25 12
Bacteroides ovatus ATCC 8483 0.96 BACOVA_05231 putative DNA polymerase IV 0.90 BACOVA_03108 hypothetical protein low > 94
Bacteroides stercoris CC31F 0.84 HMPREF1181_RS13945 DNA polymerase IV 0.67 HMPREF1181_RS09400 MmcQ/YjbR family DNA-binding protein — —
Parabacteroides merdae CL09T00C40 0.82 HMPREF1078_RS15010 DNA polymerase IV 0.56 HMPREF1078_RS04770 MmcQ/YjbR family DNA-binding protein low > 61
Phocaeicola dorei CL03T12C01 0.81 ABI39_RS09595 DNA polymerase IV 0.70 ABI39_RS09500 MmcQ/YjbR family DNA-binding protein low > 72
Phocaeicola vulgatus CL09T03C04 0.81 HMPREF1058_RS13990 DNA polymerase IV 0.70 HMPREF1058_RS13895 MmcQ/YjbR family DNA-binding protein low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.49 CA264_08955 DNA polymerase IV 0.45 CA264_05395 MmcQ-like protein low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS20685 DNA polymerase IV 0.50 ABZR88_RS16310 MmcQ/YjbR family DNA-binding protein low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS24610 DNA polymerase IV 0.26 CA265_RS14325 hypothetical protein low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF4104 DNA polymerase IV (EC 2.7.7.7) 0.31 GFF1426 Protein yjbR low > 78
Escherichia fergusonii Becca 0.33 EFB2_03787 DNA polymerase IV 0.30 EFB2_04534 putative protein YjbR low > 86
Escherichia coli BW25113 0.33 b0231 dinB DNA polymerase IV (NCBI) 0.30 b4057 yjbR hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 0.33 BNILDI_00290 dinB DNA polymerase IV 0.30 BNILDI_06375 yjbR Uncharacterized protein YjbR — —
Escherichia coli ECOR27 0.33 NOLOHH_02095 dinB DNA polymerase IV 0.30 NOLOHH_05150 yjbR Uncharacterized protein YjbR low > 57
Escherichia coli BL21 0.33 ECD_00226 DNA polymerase IV 0.30 ECD_03929 DUF419 family protein low > 60
Escherichia coli ECRC98 0.33 JDDGAC_13355 dinB DNA polymerase IV 0.30 JDDGAC_16535 yjbR Uncharacterized protein YjbR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03407 DNA polymerase IV 0.30 OHPLBJKB_03984 putative protein YjbR low > 73
Escherichia coli Nissle 1917 0.33 ECOLIN_RS01780 DNA polymerase IV 0.30 ECOLIN_RS23480 MmcQ/YjbR family DNA-binding protein low > 52
Escherichia coli ECRC102 0.33 NIAGMN_07590 dinB DNA polymerase IV 0.30 NIAGMN_10745 yjbR Uncharacterized protein YjbR — —
Escherichia coli ECRC101 0.33 OKFHMN_09730 dinB DNA polymerase IV 0.30 OKFHMN_12900 yjbR Uncharacterized protein YjbR — —
Escherichia coli ECRC99 0.33 KEDOAH_18425 dinB DNA polymerase IV 0.30 KEDOAH_15250 yjbR Uncharacterized protein YjbR — —
Escherichia coli ECRC101 0.33 MCAODC_00250 dinB DNA polymerase IV 0.30 MCAODC_03410 yjbR Uncharacterized protein YjbR — —
Escherichia coli ECOR38 0.33 HEPCGN_07825 dinB DNA polymerase IV 0.28 HEPCGN_11515 mmcQ YjbR low > 85
Serratia liquefaciens MT49 0.33 IAI46_04405 DNA polymerase IV 0.30 IAI46_22920 MmcQ/YjbR family DNA-binding protein low > 86
Enterobacter sp. TBS_079 0.33 MPMX20_00921 DNA polymerase IV 0.30 MPMX20_00275 putative protein YjbR low > 85
Pantoea sp. MT58 0.33 IAI47_15175 DNA polymerase IV 0.29 IAI47_10625 MmcQ/YjbR family DNA-binding protein low > 76
Klebsiella michiganensis M5al 0.33 BWI76_RS05530 DNA polymerase IV 0.28 BWI76_RS01940 hypothetical protein low > 92
Enterobacter asburiae PDN3 0.32 EX28DRAFT_2657 Nucleotidyltransferase/DNA polymerase involved in DNA repair 0.31 EX28DRAFT_4247 Uncharacterized protein conserved in bacteria low > 76
Rahnella sp. WP5 0.32 EX31_RS21005 DNA polymerase IV 0.29 EX31_RS11955 MmcQ/YjbR family DNA-binding protein low > 89
Echinicola vietnamensis KMM 6221, DSM 17526 0.21 Echvi_2408 Nucleotidyltransferase/DNA polymerase involved in DNA repair 0.51 Echvi_2122 Uncharacterized protein conserved in bacteria low > 79

Not shown: 64 genomes with orthologs for BT4409 only; 0 genomes with orthologs for BT2237 only