Conservation of cofitness between BT0252 and BT0578 in Bacteroides thetaiotaomicron VPI-5482

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0252 transcription-repair coupling factor (NCBI ptt file) 1.0 BT0578 excinuclease ABC subunit A (NCBI ptt file) 0.44 14
Bacteroides ovatus ATCC 8483 0.95 BACOVA_00401 transcription-repair coupling factor 0.96 BACOVA_03703 excinuclease ABC, A subunit low > 94
Bacteroides stercoris CC31F 0.87 HMPREF1181_RS04640 transcription-repair coupling factor 0.90 HMPREF1181_RS15185 excinuclease ABC subunit UvrA low > 56
Phocaeicola vulgatus CL09T03C04 0.79 HMPREF1058_RS15450 transcription-repair coupling factor 0.88 HMPREF1058_RS01735 excinuclease ABC subunit UvrA low > 67
Phocaeicola dorei CL03T12C01 0.79 ABI39_RS11420 transcription-repair coupling factor 0.88 ABI39_RS15330 excinuclease ABC subunit UvrA low > 72
Parabacteroides merdae CL09T00C40 0.67 HMPREF1078_RS02110 transcription-repair coupling factor 0.80 HMPREF1078_RS00835 excinuclease ABC subunit UvrA low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS21080 transcription-repair coupling factor 0.62 ABZR88_RS18670 excinuclease ABC subunit UvrA 0.43 20
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_1312 transcription-repair coupling factor (mfd) 0.65 Echvi_1138 excinuclease ABC, A subunit 0.38 28
Pontibacter actiniarum KMM 6156, DSM 19842 0.46 CA264_15820 transcription-repair coupling factor 0.63 CA264_18100 ABC-ATPase UvrA low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS21070 transcription-repair coupling factor 0.62 CA265_RS25080 excinuclease ABC subunit A 0.43 9
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_1326 mfd transcription-repair coupling factor 0.48 Synpcc7942_0848 uvrA excinuclease ABC subunit A 0.68 5
Ralstonia solanacearum PSI07 0.25 RPSI07_RS16040 transcription-repair coupling factor 0.48 RPSI07_RS22065 excinuclease ABC subunit UvrA low > 81
Magnetospirillum magneticum AMB-1 0.25 AMB_RS12390 transcription-repair coupling factor 0.50 AMB_RS12410 excinuclease ABC subunit UvrA low > 64
Dechlorosoma suillum PS 0.24 Dsui_2385 transcription-repair coupling factor Mfd 0.51 Dsui_1622 excinuclease ABC, A subunit 0.96 1
Bifidobacterium breve UCC2003 0.24 BBR_RS14115 transcription-repair coupling factor 0.49 BBR_RS15510 excinuclease ABC subunit UvrA 0.46 11
Variovorax sp. OAS795 0.24 ABID97_RS17285 transcription-repair coupling factor 0.46 ABID97_RS04340 excinuclease ABC subunit UvrA low > 91
Phaeobacter inhibens DSM 17395 0.24 PGA1_c14920 transcription-repair-coupling factor Mfd 0.50 PGA1_c17370 uvrABC system protein A low > 62
Shewanella loihica PV-4 0.22 Shew_1630 transcription-repair coupling factor (RefSeq) 0.47 Shew_0533 excinuclease ABC, A subunit (RefSeq) 0.61 8
Variovorax sp. SCN45 0.22 GFF412 Transcription-repair coupling factor 0.46 GFF4944 Excinuclease ABC subunit A low > 127
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS04775 transcription-repair coupling factor 0.50 A4249_RS08575 excinuclease ABC subunit UvrA low > 48
Rhizobium sp. OAE497 0.22 ABIE40_RS09310 transcription-repair coupling factor 0.50 ABIE40_RS09360 excinuclease ABC subunit UvrA low > 107

Not shown: 0 genomes with orthologs for BT0252 only; 82 genomes with orthologs for BT0578 only