Conservation of cofitness between b1800 and b4469 in Escherichia coli BW25113

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1800 yeaU predicted dehydrogenase (NCBI) 1.0 b4469 ygiQ hypothetical protein (NCBI) 0.29 1
Escherichia coli ECRC62 1.00 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 BNILDI_00820 ygiQ YgiQ family radical SAM protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 1.00 OHPLBJKB_00686 hypothetical protein low > 73
Escherichia coli ECRC98 1.00 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 JDDGAC_22550 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC99 1.00 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 KEDOAH_09230 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC101 1.00 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 OKFHMN_18915 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC101 1.00 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 MCAODC_09430 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECOR27 1.00 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 NOLOHH_10695 ygiQ YgiQ family radical SAM protein — —
Escherichia coli ECRC102 1.00 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 NIAGMN_16680 ygiQ YgiQ family radical SAM protein — —
Escherichia coli BL21 1.00 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 1.00 ECD_02888 Radical SAM superfamily protein low > 60
Escherichia coli ECOR38 1.00 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 HEPCGN_17785 ygiQ YgiQ family radical SAM protein low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS10680 tartrate dehydrogenase 0.93 BWI76_RS24310 YgiQ family radical SAM protein low > 92
Serratia liquefaciens MT49 0.84 IAI46_21025 tartrate dehydrogenase 0.83 IAI46_21835 YgiQ family radical SAM protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_28225 tartrate dehydrogenase 0.64 AO353_13235 YgiQ family radical SAM protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_4932 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.63 Pf1N1B4_1396 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_26735 tartrate dehydrogenase 0.64 AO356_08575 YgiQ family radical SAM protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_369 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.64 Pf6N2E2_3600 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 103
Pseudomonas fluorescens SBW25 0.78 PFLU_RS19735 tartrate dehydrogenase 0.64 PFLU_RS02660 YgiQ family radical SAM protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS19735 tartrate dehydrogenase 0.64 PFLU_RS02660 YgiQ family radical SAM protein low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_2396 Tartrate dehydrogenase 0.63 Psyr_0587 Radical SAM low > 86
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_2396 Tartrate dehydrogenase 0.63 Psyr_0587 Radical SAM low > 86
Acidovorax sp. GW101-3H11 0.73 Ac3H11_3259 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.60 Ac3H11_4121 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 79
Variovorax sp. OAS795 0.73 ABID97_RS25885 tartrate dehydrogenase 0.61 ABID97_RS14400 YgiQ family radical SAM protein low > 91
Variovorax sp. SCN45 0.66 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.61 GFF1034 UPF0313 [4Fe-4S] protein YgiQ low > 127
Rhodopseudomonas palustris CGA009 0.66 TX73_008960 tartrate dehydrogenase 0.57 TX73_003515 YgiQ family radical SAM protein low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3852 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.61 GFF4814 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 90
Azospirillum sp. SherDot2 0.45 MPMX19_06850 putative tartrate dehydrogenase/decarboxylase TtuC' 0.57 MPMX19_06038 hypothetical protein low > 112

Not shown: 33 genomes with orthologs for b1800 only; 27 genomes with orthologs for b4469 only