Conservation of cofitness between b2912 and b3792 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2912 ygfA putative ligase (VIMSS) 1.0 b3792 wzxE O-antigen translocase (NCBI) 0.39 11
Escherichia coli ECRC99 1.00 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.99 KEDOAH_13610 wzxE lipid III flippase WzxE — —
Escherichia coli ECRC101 1.00 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.99 MCAODC_05045 wzxE lipid III flippase WzxE — —
Escherichia coli ECRC62 1.00 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 BNILDI_04850 wzxE lipid III flippase WzxE low > 75
Escherichia coli ECRC98 1.00 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.99 JDDGAC_18165 wzxE lipid III flippase WzxE — —
Escherichia coli ECRC100 1.00 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.99 OKFHMN_14540 wzxE lipid III flippase WzxE low > 80
Escherichia coli ECRC102 1.00 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.99 NIAGMN_12295 wzxE lipid III flippase WzxE — —
Escherichia coli ECOR27 1.00 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 NOLOHH_06675 wzxE lipid III flippase WzxE low > 75
Escherichia fergusonii Becca 1.00 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase 1.00 EFB2_04847 Lipid III flippase low > 86
Escherichia coli BL21 0.99 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein 1.00 ECD_03670 O-antigen translocase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase 1.00 OHPLBJKB_04262 Lipid III flippase low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 0.99 ECOLIN_RS21765 lipid III flippase WzxE — —
Escherichia coli ECOR38 0.98 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase 1.00 HEPCGN_13250 wzxE lipid III flippase WzxE low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.88 GFF2881 WzxE protein low > 78
Enterobacter sp. TBS_079 0.82 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase 0.88 MPMX20_04483 Lipid III flippase low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.84 BWI76_RS01120 O-antigen translocase low > 92
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase 0.89 EX28DRAFT_4460 Membrane protein involved in the export of O-antigen and teichoic acid — —
Pectobacterium carotovorum WPP14 0.69 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase 0.73 HER17_RS01180 lipid III flippase WzxE low > 75
Serratia liquefaciens MT49 0.66 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase 0.79 IAI46_00630 lipid III flippase WzxE low > 86
Dickeya dadantii 3937 0.65 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase 0.60 DDA3937_RS20035 lipid III flippase WzxE low > 74
Rahnella sp. WP5 0.64 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 0.76 EX31_RS15085 lipid III flippase WzxE low > 89
Dickeya dianthicola 67-19 0.62 HGI48_RS02370 5-formyltetrahydrofolate cyclo-ligase 0.60 HGI48_RS20180 lipid III flippase WzxE low > 71
Erwinia tracheiphila SCR3 0.59 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase 0.72 LU632_RS24220 wzxE lipid III flippase WzxE — —
Dickeya dianthicola ME23 0.59 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase 0.60 DZA65_RS21225 lipid III flippase WzxE low > 75
Pantoea sp. MT58 0.59 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase 0.66 IAI47_18480 lipid III flippase WzxE low > 76
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.11 PfGW456L13_2183 WzxE protein — —
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.26 Xcc-8004.3173.1 lipopolysaccharide biosynthesis protein low > 74
Rhodanobacter denitrificans MT42 0.20 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase 0.24 LRK55_RS04935 O-antigen translocase low > 63
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase 0.24 LRK54_RS05155 O-antigen translocase low > 59
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase 0.21 OKGIIK_14745 Lipopolysaccharide biosynthesis protein low > 52
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase 0.25 ABZR86_RS04735 O-antigen translocase low > 74

Not shown: 39 genomes with orthologs for b2912 only; 1 genomes with orthologs for b3792 only