Conservation of cofitness between b3526 and b3125 in Escherichia coli BW25113

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3526 kdgK ketodeoxygluconokinase (VIMSS) 1.0 b3125 garR tartronate semialdehyde reductase (RefSeq) 0.25 19
Escherichia coli ECOR38 1.00 HEPCGN_15110 kdgK 2-dehydro-3-deoxygluconokinase 1.00 HEPCGN_17205 garR 2-hydroxy-3-oxopropionate reductase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00176 2-dehydro-3-deoxygluconokinase 1.00 OHPLBJKB_00578 2-hydroxy-3-oxopropionate reductase low > 73
Escherichia coli ECOR27 1.00 NOLOHH_08170 kdgK 2-dehydro-3-deoxygluconokinase 1.00 NOLOHH_10150 garR 2-hydroxy-3-oxopropionate reductase low > 57
Escherichia coli ECRC62 1.00 BNILDI_03385 kdgK 2-dehydro-3-deoxygluconokinase 1.00 BNILDI_01380 garR 2-hydroxy-3-oxopropionate reductase — —
Escherichia coli ECRC102 1.00 NIAGMN_13970 kdgK 2-dehydro-3-deoxygluconokinase 1.00 NIAGMN_16130 garR 2-hydroxy-3-oxopropionate reductase — —
Escherichia coli ECRC98 1.00 JDDGAC_19835 kdgK 2-dehydro-3-deoxygluconokinase 1.00 JDDGAC_22000 garR 2-hydroxy-3-oxopropionate reductase — —
Escherichia coli ECRC101 1.00 OKFHMN_16205 kdgK 2-dehydro-3-deoxygluconokinase 1.00 OKFHMN_18370 garR 2-hydroxy-3-oxopropionate reductase — —
Escherichia coli ECRC99 1.00 KEDOAH_11945 kdgK 2-dehydro-3-deoxygluconokinase 1.00 KEDOAH_09780 garR 2-hydroxy-3-oxopropionate reductase — —
Escherichia coli ECRC101 1.00 MCAODC_06720 kdgK 2-dehydro-3-deoxygluconokinase 1.00 MCAODC_08880 garR 2-hydroxy-3-oxopropionate reductase — —
Escherichia coli BL21 0.99 ECD_03374 2-dehydro-3-deoxygluconokinase 1.00 ECD_02990 tartronate semialdehyde reductase low > 60
Escherichia fergusonii Becca 0.99 EFB2_00282 2-dehydro-3-deoxygluconokinase 0.99 EFB2_00694 2-hydroxy-3-oxopropionate reductase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS20170 2-dehydro-3-deoxygluconokinase 1.00 ECOLIN_RS17960 2-hydroxy-3-oxopropionate reductase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF497 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) 0.98 GFF1536 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) low > 78
Klebsiella michiganensis M5al 0.89 BWI76_RS26750 PfkB domain-containing protein 0.95 BWI76_RS24825 2-hydroxy-3-oxopropionate reductase low > 92
Enterobacter asburiae PDN3 0.89 EX28DRAFT_4051 Sugar kinases, ribokinase family 0.91 EX28DRAFT_3182 2-hydroxy-3-oxopropionate reductase low > 76
Enterobacter sp. TBS_079 0.86 MPMX20_04411 2-dehydro-3-deoxygluconokinase 0.93 MPMX20_04033 2-hydroxy-3-oxopropionate reductase low > 85
Dickeya dadantii 3937 0.79 DDA3937_RS00580 2-dehydro-3-deoxygluconokinase 0.85 DDA3937_RS17035 2-hydroxy-3-oxopropionate reductase 0.73 52
Dickeya dianthicola ME23 0.78 DZA65_RS21825 sugar kinase 0.86 DZA65_RS18165 2-hydroxy-3-oxopropionate reductase 0.82 16
Dickeya dianthicola 67-19 0.78 HGI48_RS20810 2-dehydro-3-deoxygluconokinase 0.86 HGI48_RS17090 2-hydroxy-3-oxopropionate reductase 0.66 21
Rahnella sp. WP5 0.77 EX31_RS05435 sugar kinase 0.84 EX31_RS07980 2-hydroxy-3-oxopropionate reductase low > 89
Pectobacterium carotovorum WPP14 0.77 HER17_RS00410 sugar kinase 0.84 HER17_RS04095 2-hydroxy-3-oxopropionate reductase 0.58 38
Pantoea sp. MT58 0.73 IAI47_18565 sugar kinase 0.84 IAI47_04100 2-hydroxy-3-oxopropionate reductase low > 76
Erwinia tracheiphila SCR3 0.71 LU632_RS00390 sugar kinase 0.88 LU632_RS06330 garR 2-hydroxy-3-oxopropionate reductase low > 74
Alteromonas macleodii MIT1002 0.33 MIT1002_03302 2-dehydro-3-deoxygluconokinase 0.26 MIT1002_01976 2-hydroxy-3-oxopropionate reductase low > 70
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS12620 sugar kinase 0.24 ABZR86_RS00420 NAD(P)-dependent oxidoreductase low > 74
Rhodanobacter sp. FW510-T8 0.11 OKGIIK_01685 rbsK carbohydrate kinase 0.19 OKGIIK_03510 mmsB 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase low > 52
Rhodanobacter denitrificans MT42 0.10 LRK55_RS04840 carbohydrate kinase 0.19 LRK55_RS14400 NAD(P)-dependent oxidoreductase 0.52 19
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS05060 carbohydrate kinase 0.19 LRK54_RS14685 NAD(P)-dependent oxidoreductase low > 59
Phaeobacter inhibens DSM 17395 0.10 PGA1_c28020 fructokinase Frk 0.26 PGA1_c14880 putative 3-hydroxyisobutyrate dehydrogenase low > 62

Not shown: 35 genomes with orthologs for b3526 only; 15 genomes with orthologs for b3125 only