Conservation of cofitness between b1800 and b2029 in Escherichia coli BW25113

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1800 yeaU predicted dehydrogenase (NCBI) 1.0 b2029 gnd 6-phosphogluconate dehydrogenase (NCBI) 0.23 17
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 0.97 OHPLBJKB_01659 6-phosphogluconate dehydrogenase, decarboxylating low > 73
Escherichia coli ECRC62 1.00 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.99 BNILDI_14695 gndA NADP-dependent phosphogluconate dehydrogenase — —
Escherichia coli BL21 1.00 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 0.99 ECD_01931 6-phosphogluconate dehydrogenase, decarboxylating low > 60
Escherichia coli ECRC102 1.00 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 NIAGMN_22415 gndA NADP-dependent phosphogluconate dehydrogenase — —
Escherichia coli ECRC99 1.00 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 KEDOAH_03680 gndA NADP-dependent phosphogluconate dehydrogenase — —
Escherichia coli ECRC98 1.00 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 JDDGAC_28580 gndA NADP-dependent phosphogluconate dehydrogenase — —
Escherichia coli ECRC101 1.00 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 OKFHMN_24470 gndA NADP-dependent phosphogluconate dehydrogenase — —
Escherichia coli ECRC101 1.00 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 MCAODC_20470 gndA NADP-dependent phosphogluconate dehydrogenase — —
Escherichia coli ECOR27 1.00 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 1.00 NOLOHH_15785 gndA NADP-dependent phosphogluconate dehydrogenase — —
Escherichia coli ECOR38 1.00 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.99 HEPCGN_03175 gndA NADP-dependent phosphogluconate dehydrogenase low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS10680 tartrate dehydrogenase 0.95 BWI76_RS19025 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) low > 92
Serratia liquefaciens MT49 0.84 IAI46_21025 tartrate dehydrogenase 0.89 IAI46_08160 NADP-dependent phosphogluconate dehydrogenase — —
Variovorax sp. OAS795 0.73 ABID97_RS25885 tartrate dehydrogenase 0.55 ABID97_RS10190 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase low > 91
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS32005 tartrate dehydrogenase 0.76 QEN71_RS20525 NADP-dependent phosphogluconate dehydrogenase low > 153
Paraburkholderia graminis OAS925 0.71 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase 0.74 ABIE53_005122 6-phosphogluconate dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS30235 tartrate dehydrogenase 0.73 BPHYT_RS29625 6-phosphogluconate dehydrogenase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase 0.75 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating) low > 103
Pantoea sp. MT58 0.67 IAI47_17525 tartrate dehydrogenase 0.89 IAI47_07035 NADP-dependent phosphogluconate dehydrogenase — —
Dickeya dadantii 3937 0.66 DDA3937_RS04645 tartrate dehydrogenase 0.89 DDA3937_RS06805 NADP-dependent phosphogluconate dehydrogenase low > 74
Dickeya dianthicola ME23 0.66 DZA65_RS04525 tartrate dehydrogenase 0.88 DZA65_RS07180 NADP-dependent phosphogluconate dehydrogenase low > 75
Variovorax sp. SCN45 0.66 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.55 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) low > 127
Dickeya dianthicola 67-19 0.65 HGI48_RS04605 tartrate dehydrogenase 0.87 HGI48_RS06840 NADP-dependent phosphogluconate dehydrogenase low > 71
Agrobacterium fabrum C58 0.46 Atu3402 3-isopropylmalate dehydrogenase 0.46 Atu1526 6-phosphogluconate dehydrogenase, decarboxylating low > 89
Sinorhizobium meliloti 1021 0.45 SMa1846 3-isopropylmalate dehydrogenase 0.47 SMc04262 6-phosphogluconate dehydrogenase low > 103
Bifidobacterium breve UCC2003 0.36 BBR_RS12870 3-isopropylmalate dehydrogenase 0.53 BBR_RS11465 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) — —
Mycobacterium tuberculosis H37Rv 0.31 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) 0.54 Rv1844c Probable 6-phosphogluconate dehydrogenase Gnd1 — —
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS00740 isocitrate dehydrogenase 0.75 ABZR86_RS13330 NADP-dependent phosphogluconate dehydrogenase — —

Not shown: 32 genomes with orthologs for b1800 only; 26 genomes with orthologs for b2029 only