Conservation of cofitness between b2905 and b1222 in Escherichia coli BW25113

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2905 gcvT glycine cleavage system aminomethyltransferase T (NCBI) 1.0 b1222 narX sensory histidine kinase in two-component regulatory system with NarL (NCBI) 0.33 15
Escherichia coli ECRC62 1.00 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT 1.00 BNILDI_18680 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00810 Aminomethyltransferase 1.00 OHPLBJKB_02462 Nitrate/nitrite sensor protein NarX low > 73
Escherichia coli BL21 1.00 ECD_02737 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 1.00 ECD_01200 sensory histidine kinase in two-component regulatory system with NarL low > 60
Escherichia coli ECOR27 1.00 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT 1.00 NOLOHH_20530 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 57
Escherichia coli ECOR38 0.99 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT 1.00 HEPCGN_24985 narX nitrate/nitrite two-component system sensor histidine kinase NarX low > 85
Escherichia coli ECRC101 0.99 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT 1.00 MCAODC_21735 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia fergusonii Becca 0.99 EFB2_00997 Aminomethyltransferase 1.00 EFB2_02704 Nitrate/nitrite sensor protein NarX low > 86
Escherichia coli ECRC99 0.99 KEDOAH_08620 gcvT glycine cleavage system aminomethyltransferase GcvT 1.00 KEDOAH_25520 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia coli ECRC101 0.99 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT 1.00 OKFHMN_28525 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia coli ECRC98 0.99 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT 1.00 JDDGAC_06050 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia coli ECRC102 0.99 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT 1.00 NIAGMN_27710 narX nitrate/nitrite two-component system sensor histidine kinase NarX — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS16175 glycine cleavage system aminomethyltransferase GcvT 1.00 ECOLIN_RS07380 nitrate/nitrite two-component system sensor histidine kinase NarX — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3005 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.87 GFF2764 Nitrate/nitrite sensor protein (EC 2.7.3.-) low > 78
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2957 glycine cleavage system T protein 0.81 EX28DRAFT_0849 Signal transduction histidine kinase, nitrate/nitrite-specific low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03764 Aminomethyltransferase 0.82 MPMX20_02617 Nitrate/nitrite sensor protein NarX low > 85
Klebsiella michiganensis M5al 0.90 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.77 BWI76_RS17345 nitrate/nitrite two-component system sensor histidine kinase NarX low > 92
Serratia liquefaciens MT49 0.86 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.49 IAI46_15605 nitrate/nitrite two-component system sensor histidine kinase NarX low > 86
Rahnella sp. WP5 0.84 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.43 EX31_RS06555 nitrate/nitrite two-component system sensor histidine kinase NarX low > 89
Dickeya dianthicola ME23 0.79 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.44 DZA65_RS12485 nitrate/nitrite two-component system sensor histidine kinase NarX low > 75
Dickeya dadantii 3937 0.79 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT 0.45 DDA3937_RS11945 nitrate/nitrite two-component system sensor histidine kinase NarX low > 74
Dickeya dianthicola 67-19 0.79 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT 0.44 HGI48_RS12035 nitrate/nitrite two-component system sensor histidine kinase NarX low > 71
Pectobacterium carotovorum WPP14 0.78 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 0.50 HER17_RS09765 nitrate/nitrite two-component system sensor histidine kinase NarX 0.56 19
Pseudomonas stutzeri RCH2 0.58 Psest_0181 glycine cleavage system T protein 0.24 Psest_3490 Signal transduction histidine kinase, nitrate/nitrite-specific low > 67
Pseudomonas sp. RS175 0.53 PFR28_04316 Aminomethyltransferase 0.19 PFR28_01629 Nitrate/nitrite sensor protein NarX low > 88
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_08735 glycine cleavage system protein T 0.19 AO353_22080 histidine kinase low > 101
Paraburkholderia graminis OAS925 0.48 ABIE53_000236 aminomethyltransferase 0.12 ABIE53_005344 two-component system nitrate/nitrite sensor histidine kinase NarX low > 113
Ralstonia solanacearum GMI1000 0.47 RS_RS16500 aminomethyltransferase 0.12 RS_RS21840 nitrate/nitrite sensor histidine kinase low > 80
Ralstonia solanacearum PSI07 0.47 RPSI07_RS08585 glycine cleavage system protein T 0.12 RPSI07_RS06680 HAMP domain-containing protein low > 81
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS08650 glycine cleavage system protein T 0.12 RALBFv3_RS16765 histidine kinase low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS04960 glycine cleavage system protein T 0.12 UW163_RS18120 histidine kinase — —

Not shown: 64 genomes with orthologs for b2905 only; 2 genomes with orthologs for b1222 only