Conservation of cofitness between b3528 and b0676 in Escherichia coli BW25113

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3528 dctA C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) 1.0 b0676 nagC DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) 0.31 12
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20180 C4-dicarboxylate transporter DctC 1.00 ECOLIN_RS03610 DNA-binding transcriptional regulator NagC
Escherichia coli ECOR38 1.00 HEPCGN_15100 dctA C4-dicarboxylate transporter DctC 1.00 HEPCGN_01060 nagC DNA-binding transcriptional regulator NagC 0.69 18
Escherichia coli ECOR27 1.00 NOLOHH_08160 dctA C4-dicarboxylate transporter DctC 1.00 NOLOHH_23550 nagC DNA-binding transcriptional regulator NagC low > 57
Escherichia coli ECRC62 1.00 BNILDI_03395 dctA C4-dicarboxylate transporter DctC 1.00 BNILDI_21555 nagC DNA-binding transcriptional regulator NagC
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00174 Aerobic C4-dicarboxylate transport protein 1.00 OHPLBJKB_03039 N-acetylglucosamine repressor low > 73
Escherichia coli ECRC102 1.00 NIAGMN_13960 dctA C4-dicarboxylate transporter DctC 1.00 NIAGMN_05225 nagC DNA-binding transcriptional regulator NagC
Escherichia coli ECRC99 1.00 KEDOAH_11955 dctA C4-dicarboxylate transporter DctC 1.00 KEDOAH_20800 nagC DNA-binding transcriptional regulator NagC
Escherichia coli BL21 1.00 ECD_03376 C4-dicarboxylic acid, orotate and citrate transporter 1.00 ECD_00633 N-acetylglucosamine-inducible nag divergent operon transcriptional repressor low > 60
Escherichia coli ECRC101 1.00 MCAODC_06710 dctA C4-dicarboxylate transporter DctC 1.00 MCAODC_26385 nagC DNA-binding transcriptional regulator NagC
Escherichia coli ECRC101 1.00 OKFHMN_16195 dctA C4-dicarboxylate transporter DctC 1.00 OKFHMN_07170 nagC DNA-binding transcriptional regulator NagC
Escherichia coli ECRC98 1.00 JDDGAC_19825 dctA C4-dicarboxylate transporter DctC 1.00 JDDGAC_10820 nagC DNA-binding transcriptional regulator NagC
Escherichia fergusonii Becca 1.00 EFB2_00280 Aerobic C4-dicarboxylate transport protein 1.00 EFB2_03427 N-acetylglucosamine repressor low > 86
Klebsiella michiganensis M5al 0.93 BWI76_RS26760 C4-dicarboxylate transport protein DctA (from data) 0.90 BWI76_RS08205 DNA-binding transcriptional dual regulator NagC low > 92
Enterobacter sp. TBS_079 0.93 MPMX20_04413 Aerobic C4-dicarboxylate transport protein 0.91 MPMX20_01322 N-acetylglucosamine repressor low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4049 Na+/H+-dicarboxylate symporters 0.92 EX28DRAFT_2299 Transcriptional regulator/sugar kinase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF495 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate 0.94 GFF4584 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family low > 78
Rahnella sp. WP5 0.88 EX31_RS05445 dicarboxylate/amino acid:cation symporter 0.81 EX31_RS23255 ROK family protein low > 89
Serratia liquefaciens MT49 0.87 IAI46_00550 dicarboxylate/amino acid:cation symporter 0.83 IAI46_06080 ROK family transcriptional regulator low > 86
Pantoea sp. MT58 0.86 IAI47_18585 dicarboxylate/amino acid:cation symporter 0.81 IAI47_13890 ROK family transcriptional regulator low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS00330 dicarboxylate/amino acid:cation symporter 0.80 LU632_RS16255 ROK family transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS20835 dicarboxylate/amino acid:cation symporter 0.76 HGI48_RS06345 ROK family protein low > 71
Dickeya dianthicola ME23 0.85 DZA65_RS21850 dicarboxylate/amino acid:cation symporter 0.76 DZA65_RS06690 ROK family protein low > 75
Pectobacterium carotovorum WPP14 0.84 HER17_RS00400 dicarboxylate/amino acid:cation symporter 0.77 HER17_RS15115 ROK family protein low > 75
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_3707 Sodium:dicarboxylate symporter 0.09 Psyr_4501 transcriptional regulator, MarR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_3707 Sodium:dicarboxylate symporter 0.09 Psyr_4501 transcriptional regulator, MarR family low > 86
Variovorax sp. OAS795 0.72 ABID97_RS26560 dicarboxylate/amino acid:cation symporter 0.17 ABID97_RS00440 ROK family protein
Variovorax sp. SCN45 0.72 GFF822 Na+/H+-dicarboxylate symporter 0.16 GFF3689 FIG01198523: hypothetical protein low > 127
Azospirillum sp. SherDot2 0.62 MPMX19_04253 Aerobic C4-dicarboxylate transport protein 0.15 MPMX19_03621 N-acetylglucosamine repressor 0.44 18
Rhizobium sp. OAE497 0.62 ABIE40_RS26345 dicarboxylate/amino acid:cation symporter 0.13 ABIE40_RS23550 ROK family transcriptional regulator low > 107
Sinorhizobium meliloti 1021 0.61 SM_b20611 C4-dicarboxylate transporter DctA 0.14 SMa2303 ROK family transcriptional regulator low > 103
Acidovorax sp. GW101-3H11 0.58 Ac3H11_719 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate 0.17 Ac3H11_2882 FIG01198523: hypothetical protein low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.53 CA265_RS15560 glutamate/aspartate:proton symporter GltP 0.17 CA265_RS23280 sugar kinase low > 88

Not shown: 39 genomes with orthologs for b3528 only; 12 genomes with orthologs for b0676 only