Homologs of GFF4415 from Variovorax sp. SCN45

Conjugative transfer protein TrbC
SEED: Conjugative transfer protein TrbC
KEGG: type IV secretion system protein VirB2

25 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4415 Conjugative transfer protein TrbC insig. 100 100
o Shewanella sp. ANA-3 Shewana3_1283 conjugal transfer protein TrbC (RefSeq) insig. 94 99
o Dickeya dianthicola 67-19 HGI48_RS03920 TrbC/VIRB2 family protein insig. 83 98
o Ralstonia solanacearum GMI1000 RS_RS12950 conjugal transfer protein TrbC no data 90 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4436 Conjugative transfer protein TrbC no data 90 98
  Variovorax sp. SCN45 GFF6578 Conjugative transfer protein TrbC no data 87 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3452 Conjugative transfer protein TrbC no data 77 100
  Variovorax sp. SCN45 GFF4848 Conjugative transfer protein TrbC no data 86 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4177 Conjugative transfer protein TrbC no data 92 95
  Pseudomonas aeruginosa PA14 IKLFDK_12830 conjugal transfer protein TrbC no data 90 95
  Rhodopseudomonas palustris CGA009 TX73_021365 TrbC/VirB2 family protein insig. 67 66
  Rhodopseudomonas palustris CGA009 TX73_011520 TrbC/VirB2 family protein sig. 76 55
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3073 Type IV secretory pathway, VirB2 components (pilins) insig. 64 67
o Castellaniella sp019104865 MT123 ABCV34_RS00160 TrbC/VirB2 family protein insig. 79 94
  Dickeya dadantii 3937 DDA3937_RS04000 TrbC/VirB2 family protein insig. 93 64
  Dickeya dianthicola 67-19 HGI48_RS08425 TrbC/VirB2 family protein insig. 93 64
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2571 Type IV secretory pathway, VirB2 components (pilins) no data 76 55
  Xanthobacter sp. DMC5 GFF3637 hypothetical protein insig. 85 67
  Xanthobacter sp. DMC5 GFF2636 hypothetical protein insig. 90 64
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0388 Type IV secretory pathway, VirB2 components (pilins) insig. 79 53
  Rhodospirillum rubrum S1H Rru_A0807 Conjugal transfer protein TrbC (NCBI) insig. 74 72
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2913 Type IV secretory pathway, VirB2 components (pilins) insig. 83 49
  Sphingobium sp. HT1-2 GFF189 Conjugative transfer protein TrbC cofit 73 55
  Marinobacter adhaerens HP15 HP15_p42g51 prepilin insig. 34 67
  Agrobacterium fabrum C58 Atu6040 conjugal transfer protein insig. 42 42