Conservation of cofitness between Xcc-8004.3923.1 and Xcc-8004.5237.1 in Xanthomonas campestris pv. campestris strain 8004

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3923.1 Short-chain dehydrogenase/reductase SDR 1.0 Xcc-8004.5237.1 Uronate isomerase (EC 5.3.1.12) 0.31 19
Rhizobium sp. OAE497 0.71 ABIE40_RS30240 SDR family oxidoreductase 0.54 ABIE40_RS00130 glucuronate isomerase low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.65 A4249_RS02360 SDR family oxidoreductase 0.67 A4249_RS07745 glucuronate isomerase low > 48
Pantoea sp. MT58 0.63 IAI47_09865 SDR family oxidoreductase 0.14 IAI47_02910 glucuronate isomerase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF3116 FIG00553873: hypothetical protein 0.16 GFF3095 Uronate isomerase (EC 5.3.1.12) low > 78
Escherichia coli ECRC100 0.61 OKFHMN_18980 yghA NADP(+)-dependent aldehyde reductase 0.15 OKFHMN_18520 uxaC glucuronate isomerase low > 80
Escherichia coli Nissle 1917 0.61 ECOLIN_RS17295 NADP(+)-dependent aldehyde reductase 0.15 ECOLIN_RS17830 glucuronate isomerase low > 55
Escherichia coli ECRC102 0.61 NIAGMN_16745 yghA NADP(+)-dependent aldehyde reductase 0.15 NIAGMN_16285 uxaC glucuronate isomerase — —
Escherichia coli ECOR38 0.61 HEPCGN_17840 yghA NADP(+)-dependent aldehyde reductase 0.15 HEPCGN_17375 uxaC glucuronate isomerase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_00696 putative oxidoreductase YghA 0.15 OHPLBJKB_00610 Uronate isomerase low > 73
Escherichia fergusonii Becca 0.61 EFB2_00805 putative oxidoreductase YghA 0.15 EFB2_00720 Uronate isomerase low > 86
Escherichia coli BL21 0.61 ECD_02878 putative oxidoreductase 0.15 ECD_02961 uronate isomerase 0.66 44
Escherichia coli ECRC62 0.61 BNILDI_00760 yghA NADP(+)-dependent aldehyde reductase 0.15 BNILDI_01195 uxaC glucuronate isomerase low > 75
Escherichia coli ECRC99 0.61 KEDOAH_09165 yghA NADP(+)-dependent aldehyde reductase 0.15 KEDOAH_09625 uxaC glucuronate isomerase — —
Escherichia coli ECRC98 0.61 JDDGAC_22615 yghA NADP(+)-dependent aldehyde reductase 0.15 JDDGAC_22155 uxaC glucuronate isomerase low > 86
Escherichia coli BW25113 0.61 b3003 yghA oxidoreductase (NCBI) 0.15 b3092 uxaC glucuronate isomerase (NCBI) low > 76
Escherichia coli ECRC101 0.61 MCAODC_09495 yghA NADP(+)-dependent aldehyde reductase 0.15 MCAODC_09035 uxaC glucuronate isomerase low > 87
Escherichia coli ECOR27 0.61 NOLOHH_10755 yghA NADP(+)-dependent aldehyde reductase 0.15 NOLOHH_10320 uxaC glucuronate isomerase low > 75
Alteromonas macleodii MIT1002 0.60 MIT1002_02512 putative oxidoreductase YghA 0.65 MIT1002_02431 Uronate isomerase low > 70
Klebsiella michiganensis M5al 0.60 BWI76_RS14125 SDR family oxidoreductase 0.16 BWI76_RS23645 uronate isomerase low > 92
Rahnella sp. WP5 0.60 EX31_RS01195 SDR family oxidoreductase 0.14 EX31_RS12675 glucuronate isomerase 0.38 29
Enterobacter sp. TBS_079 0.60 MPMX20_02213 putative oxidoreductase YghA 0.15 MPMX20_04001 Uronate isomerase low > 85
Enterobacter asburiae PDN3 0.60 EX28DRAFT_1253 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.15 EX28DRAFT_3160 Glucuronate isomerase low > 76
Azospirillum sp. SherDot2 0.58 MPMX19_03043 putative oxidoreductase YghA 0.67 MPMX19_05792 Uronate isomerase low > 112
Bosea sp. OAE506 0.57 ABIE41_RS01170 SDR family oxidoreductase 0.67 ABIE41_RS07850 glucuronate isomerase low > 77
Mucilaginibacter yixingensis YX-36 DSM 26809 0.57 ABZR88_RS21430 SDR family oxidoreductase 0.20 ABZR88_RS13040 glucuronate isomerase 0.43 19
Sinorhizobium meliloti 1021 0.54 SM_b20073 oxidoreductase 0.60 SM_b21354 glucuronate isomerase low > 103
Pontibacter actiniarum KMM 6156, DSM 19842 0.48 CA264_17070 NAD(P)-dependent oxidoreductase 0.16 CA264_13950 glucuronate isomerase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS09980 NAD(P)-dependent oxidoreductase 0.18 CA265_RS19870 Glucuronate isomerase (EC 5.3.1.12) (from data) low > 88
Dickeya dianthicola 67-19 0.23 HGI48_RS06980 SDR family oxidoreductase 0.14 HGI48_RS02800 glucuronate isomerase low > 71

Not shown: 22 genomes with orthologs for Xcc-8004.3923.1 only; 16 genomes with orthologs for Xcc-8004.5237.1 only