Conservation of cofitness between TX73_016660 and TX73_002195 in Rhodopseudomonas palustris CGA009

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_016660 DegQ family serine endoprotease 1.0 TX73_002195 D-glycerate dehydrogenase 0.60 15
Bosea sp. OAE506 0.53 ABIE41_RS14685 Do family serine endopeptidase 0.75 ABIE41_RS00400 D-glycerate dehydrogenase — —
Rhizobium sp. OAE497 0.50 ABIE40_RS08040 DegQ family serine endoprotease 0.71 ABIE40_RS00215 D-glycerate dehydrogenase low > 107
Agrobacterium fabrum C58 0.50 Atu1915 htrA family protein 0.72 Atu0077 D-isomer specific 2-hydroxyacid dehydrogenases family protein low > 89
Sinorhizobium meliloti 1021 0.47 SMc01280 protease 0.73 SMc02849 2-hydroxyacid dehydrogenase low > 103
Magnetospirillum magneticum AMB-1 0.47 AMB_RS17615 PDZ domain-containing protein 0.69 AMB_RS00985 D-glycerate dehydrogenase 0.53 59
Rhodospirillum rubrum S1H 0.42 Rru_A2662 Peptidase S1C, Do (NCBI) 0.66 Rru_A3790 Glycolate reductase (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS07900 Do family serine endopeptidase 0.60 A4249_RS12365 D-glycerate dehydrogenase low > 48
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01341 DegP/HtrA-family serine protease 0.71 CCNA_03838 gluconate 2-dehydrogenase/glyoxylate reductase/hydroxypyruvate reductase low > 67
Caulobacter crescentus NA1000 0.37 CCNA_01341 DegP/HtrA-family serine protease 0.71 CCNA_03838 gluconate 2-dehydrogenase/glyoxylate reductase/hydroxypyruvate reductase low > 66
Phaeobacter inhibens DSM 17395 0.36 PGA1_c01920 protease DegQ 0.63 PGA1_c28260 glyoxylate reductase GyaR low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF2974 Outer membrane stress sensor protease DegQ, serine protease 0.24 GFF458 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) low > 78
Escherichia coli ECRC98 0.29 JDDGAC_21430 degQ serine endoprotease DegQ 0.25 JDDGAC_19650 ghrB glyoxylate/hydroxypyruvate reductase GhrB low > 86
Escherichia coli ECRC100 0.29 OKFHMN_17805 degQ serine endoprotease DegQ 0.25 OKFHMN_16020 ghrB glyoxylate/hydroxypyruvate reductase GhrB low > 80
Escherichia coli ECRC101 0.29 MCAODC_08325 degQ serine endoprotease DegQ 0.25 MCAODC_06535 ghrB glyoxylate/hydroxypyruvate reductase GhrB low > 87
Escherichia coli ECRC99 0.29 KEDOAH_10345 degQ serine endoprotease DegQ 0.25 KEDOAH_12130 ghrB glyoxylate/hydroxypyruvate reductase GhrB — —
Escherichia coli ECRC102 0.29 NIAGMN_15565 degQ serine endoprotease DegQ 0.25 NIAGMN_13780 ghrB glyoxylate/hydroxypyruvate reductase GhrB — —
Escherichia coli BL21 0.28 ECD_03094 serine endoprotease, periplasmic 0.25 ECD_03403 glyoxylate/hydroxypyruvate reductase B low > 61
Escherichia coli ECRC62 0.28 BNILDI_01930 degQ serine endoprotease DegQ 0.25 BNILDI_03580 ghrB glyoxylate/hydroxypyruvate reductase GhrB low > 75
Escherichia coli ECOR27 0.28 NOLOHH_09605 degQ serine endoprotease DegQ 0.25 NOLOHH_07965 ghrB glyoxylate/hydroxypyruvate reductase GhrB low > 75
Escherichia coli BW25113 0.28 b3234 degQ serine endoprotease, periplasmic (NCBI) 0.25 b3553 yiaE putative dehydrogenase (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_00470 Periplasmic pH-dependent serine endoprotease DegQ 0.25 OHPLBJKB_00153 Glyoxylate/hydroxypyruvate reductase B low > 73
Escherichia coli ECOR38 0.28 HEPCGN_16675 degQ serine endoprotease DegQ 0.25 HEPCGN_14910 ghrB glyoxylate/hydroxypyruvate reductase GhrB low > 87
Escherichia coli Nissle 1917 0.28 ECOLIN_RS18545 serine endoprotease DegQ 0.25 ECOLIN_RS20330 glyoxylate/hydroxypyruvate reductase GhrB low > 55
Escherichia fergusonii Becca 0.28 EFB2_00596 Periplasmic pH-dependent serine endoprotease DegQ 0.25 EFB2_00254 Glyoxylate/hydroxypyruvate reductase B low > 86
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.4948.1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 0.29 Xcc-8004.1956.1 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) low > 74
Pantoea sp. MT58 0.27 IAI47_17260 serine endoprotease DegQ 0.25 IAI47_00110 glyoxylate/hydroxypyruvate reductase GhrB low > 76

Not shown: 17 genomes with orthologs for TX73_016660 only; 29 genomes with orthologs for TX73_002195 only