| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_2108 | | 23S rRNA m(2)G-2445 methyltransferase | 1.0 | Psyr_0589 | | protein of unknown function DUF403:Protein of unknown function DUF404:Protein of unknown function DUF407 | 0.35 | 10 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_2108 | | 23S rRNA m(2)G-2445 methyltransferase | 1.00 | Psyr_0589 | | protein of unknown function DUF403:Protein of unknown function DUF404:Protein of unknown function DUF407 | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_3844 | | 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) | 0.84 | Pf1N1B4_1392 | | Protein containing domains DUF404, DUF407, DUF403 | low | > 87 |
| Pseudomonas sp. DMC3 | 0.91 | GFF5254 | | Ribosomal RNA large subunit methyltransferase K/L | 0.83 | GFF3241 | | putative protein | low | > 89 |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_4094 | | 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) | 0.83 | PfGW456L13_135 | | Protein containing domains DUF404, DUF407, DUF403 | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.90 | AO353_00775 | | 50S rRNA methyltransferase | 0.83 | AO353_13285 | | molybdopterin oxidoreductase | low | > 101 |
| Pseudomonas lactucae CFBP13502 | 0.90 | GEMAOFIL_04331 | | Ribosomal RNA large subunit methyltransferase K/L | 0.82 | GEMAOFIL_00759 | | hypothetical protein | low | > 93 |
| Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_02605 | | 50S rRNA methyltransferase | 0.82 | AO356_08555 | | molybdopterin oxidoreductase | low | > 104 |
| Pseudomonas simiae WCS417 | 0.89 | PS417_20930 | | 50S rRNA methyltransferase | 0.83 | PS417_02610 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.89 | PFLU_RS22545 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.83 | PFLU_RS02680 | | circularly permuted type 2 ATP-grasp protein | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.89 | Pf6N2E2_2346 | | 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) | 0.82 | Pf6N2E2_3593 | | Protein containing domains DUF404, DUF407, DUF403 | low | > 103 |
| Pseudomonas fluorescens SBW25 | 0.89 | PFLU_RS22545 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.83 | PFLU_RS02680 | | circularly permuted type 2 ATP-grasp protein | 0.58 | 92 |
| Pseudomonas sp. RS175 | 0.89 | PFR28_01055 | | Ribosomal RNA large subunit methyltransferase K/L | 0.81 | PFR28_05141 | | hypothetical protein | low | > 88 |
| Pseudomonas sp. SVBP6 | 0.87 | COO64_RS05295 | rlmKL | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.77 | COO64_RS18005 | | circularly permuted type 2 ATP-grasp protein | low | > 93 |
| Pseudomonas segetis P6 | 0.84 | MPMX49_03025 | | Ribosomal RNA large subunit methyltransferase K/L | 0.71 | MPMX49_01228 | | hypothetical protein | low | > 75 |
| Pseudomonas sp. S08-1 | 0.79 | OH686_03110 | | 23S rRNA (guanine(2445)-N(2))-methyltransferase / 23S rRNA (guanine(2069)-N(7))-methyltransferase | 0.72 | OH686_15965 | | Protein containing domains DUF404, DUF407, DUF403 | low | > 80 |
| Pseudomonas aeruginosa PA14 | 0.77 | IKLFDK_15510 | | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | 0.66 | IKLFDK_28915 | | molybdopterin oxidoreductase | low | > 100 |
| Marinobacter adhaerens HP15 | 0.45 | HP15_1379 | | RNA methylase | 0.45 | HP15_3591 | | protein containing DUF404, bacteria N-terminal / DUF403, bacteria / DUF407 | low | > 73 |
Not shown: 48 genomes with orthologs for Psyr_2108 only; 30 genomes with orthologs for Psyr_0589 only