Conservation of cofitness between Pf6N2E2_4435 and Pf6N2E2_4471 in Pseudomonas fluorescens FW300-N2E2

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_4435 Regulator of sigma D 1.0 Pf6N2E2_4471 ABC-type multidrug transport system, permease component 0.31 14
Pseudomonas sp. RS175 0.99 PFR28_04361 Regulator of sigma D 0.89 PFR28_04330 Inner membrane transport permease YhhJ low > 88
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_12810 transcriptional regulator 0.94 AO356_12970 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_08965 transcriptional regulator 0.87 AO353_08800 hypothetical protein low > 101
Pseudomonas simiae WCS417 0.86 PS417_27505 transcriptional regulator 0.86 PS417_27330 membrane protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS29185 Rsd/AlgQ family anti-sigma factor 0.86 PFLU_RS28985 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25 0.85 PFLU_RS29185 Rsd/AlgQ family anti-sigma factor 0.86 PFLU_RS28985 ABC transporter permease low > 109
Pseudomonas stutzeri RCH2 0.65 Psest_3743 Regulator of sigma D 0.48 Psest_4261 ABC-type multidrug transport system, permease component low > 67
Pseudomonas putida KT2440 0.64 PP_0191 Transcriptional regulatory protein AlgQ 0.80 PP_5208 putative translation related protein low > 96
Klebsiella michiganensis M5al 0.30 BWI76_RS01560 Rsd/AlgQ family anti-sigma factor 0.46 BWI76_RS03505 membrane protein low > 92
Alteromonas macleodii MIT1002 0.30 MIT1002_03798 Regulator of sigma D 0.43 MIT1002_00921 Inner membrane transport permease YhhJ low > 70
Serratia liquefaciens MT49 0.28 IAI46_01325 Rsd/AlgQ family anti-sigma factor 0.20 IAI46_06595 ABC transporter permease low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF4197 Regulator of sigma D 0.48 GFF527 FIG01045128: hypothetical protein low > 78
Enterobacter sp. TBS_079 0.26 MPMX20_00218 Regulator of sigma D 0.18 MPMX20_01420 putative multidrug ABC transporter permease YbhR low > 85
Escherichia coli ECRC101 0.25 MCAODC_03870 rsd sigma D regulator 0.48 MCAODC_06995 yadH ABC-2 family transporter protein low > 87
Escherichia coli ECRC62 0.25 BNILDI_06010 rsd sigma D regulator 0.48 BNILDI_03145 ABC-2 family transporter protein low > 75
Escherichia coli BL21 0.25 ECD_03872 stationary phase protein, binds sigma 70 RNA polymerase subunit 0.48 ECD_03335 putative ABC transporter permease low > 61
Escherichia coli ECRC102 0.25 NIAGMN_11120 rsd sigma D regulator 0.48 NIAGMN_14245 yadH ABC-2 family transporter protein — —
Escherichia coli ECRC98 0.25 JDDGAC_16995 rsd sigma D regulator 0.48 JDDGAC_20105 yadH ABC-2 family transporter protein low > 86
Escherichia coli BW25113 0.25 b3995 rsd stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) 0.48 b3485 yhhJ predicted transporter subunit: membrane component of ABC superfamily (RefSeq) low > 76
Escherichia coli ECRC100 0.25 OKFHMN_13370 rsd sigma D regulator 0.48 OKFHMN_16475 yadH ABC-2 family transporter protein low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_04055 Regulator of sigma D 0.48 OHPLBJKB_00216 Inner membrane transport permease YhhJ low > 73
Enterobacter asburiae PDN3 0.25 EX28DRAFT_4537 Regulator of sigma D 0.19 EX28DRAFT_2199 ABC-type multidrug transport system, permease component low > 76
Escherichia coli ECRC99 0.25 KEDOAH_14790 rsd sigma D regulator 0.48 KEDOAH_11665 yadH ABC-2 family transporter protein — —
Escherichia coli ECOR38 0.25 HEPCGN_12005 rsd sigma D regulator 0.48 HEPCGN_15395 ABC-2 family transporter protein low > 87
Escherichia coli ECOR27 0.25 NOLOHH_05515 rsd sigma D regulator 0.48 NOLOHH_08410 ABC-2 family transporter protein low > 75
Escherichia fergusonii Becca 0.24 EFB2_04616 Regulator of sigma D 0.48 EFB2_00327 Inner membrane transport permease YhhJ low > 86
Escherichia coli Nissle 1917 0.24 ECOLIN_RS23045 sigma D regulator 0.48 ECOLIN_RS19935 ABC transporter permease low > 55

Not shown: 18 genomes with orthologs for Pf6N2E2_4435 only; 13 genomes with orthologs for Pf6N2E2_4471 only