Conservation of cofitness between PP_4927 and PP_4872 in Pseudomonas putida KT2440

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4927 Cyclolysin secretion/processing ATP-binding protein CyaB 1.0 PP_4872 putative enzyme of unknown function 0.17 16
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_3076 Type I secretion system ATPase, HlyB 0.87 Psyr_0587 Radical SAM low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_3076 Type I secretion system ATPase, HlyB 0.87 Psyr_0587 Radical SAM 0.34 19
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF1396 cyclolysin secretion ATP-binding protein 0.66 GFF4814 Fe-S OXIDOREDUCTASE (1.8.-.-) low > 90
Variovorax sp. SCN45 0.59 GFF1930 RTX toxin transporter, ATP-binding protein 0.66 GFF1034 UPF0313 [4Fe-4S] protein YgiQ low > 127
Escherichia fergusonii Becca 0.54 EFB2_04223 Alpha-hemolysin translocation ATP-binding protein HlyB 0.61 EFB2_00795 hypothetical protein low > 86
Azospirillum sp. SherDot2 0.54 MPMX19_05206 Toxin RTX-I translocation ATP-binding protein 0.57 MPMX19_06038 hypothetical protein low > 112
Escherichia coli ECRC100 0.52 OKFHMN_00205 ehxB enterohemolysin T1SS ABC transporter permease/ATPase EhxB 0.61 OKFHMN_18915 ygiQ YgiQ family radical SAM protein low > 80
Escherichia coli ECRC98 0.52 JDDGAC_29905 ehxB enterohemolysin T1SS ABC transporter permease/ATPase EhxB 0.61 JDDGAC_22550 ygiQ YgiQ family radical SAM protein low > 86
Escherichia coli ECRC101 0.52 MCAODC_15345 ehxB enterohemolysin T1SS ABC transporter permease/ATPase EhxB 0.61 MCAODC_09430 ygiQ YgiQ family radical SAM protein low > 87
Escherichia coli ECRC102 0.52 NIAGMN_28525 ehxB enterohemolysin T1SS ABC transporter permease/ATPase EhxB 0.61 NIAGMN_16680 ygiQ YgiQ family radical SAM protein — —
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_07260 type I secretion system permease/ATPase 0.61 CSW01_08605 YgiQ family radical SAM protein low > 62
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS05835 peptidase domain-containing ABC transporter 0.33 ABI39_RS11465 YgiQ family radical SAM protein low > 72
Klebsiella michiganensis M5al 0.22 BWI76_RS02370 colicin V synthesis protein 0.60 BWI76_RS24310 YgiQ family radical SAM protein low > 92
Shewanella oneidensis MR-1 0.21 SOA0049 toxin secretion ABC transporter, ATP-binding subunit/permease protein, putative (NCBI ptt file) 0.59 SO0311 hypothetical Fe-S oxidoreductase (NCBI ptt file) low > 76
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS02310 peptidase domain-containing ABC transporter 0.33 HMPREF1058_RS15500 YgiQ family radical SAM protein low > 67
Alteromonas macleodii MIT1002 0.20 MIT1002_03653 RTX-I toxin determinant B 0.60 MIT1002_01793 ribosomal protein S12 methylthiotransferase low > 70
Serratia liquefaciens MT49 0.20 IAI46_11865 peptidase domain-containing ABC transporter 0.60 IAI46_21835 YgiQ family radical SAM protein 0.36 44
Rahnella sp. WP5 0.20 EX31_RS15645 peptidase domain-containing ABC transporter 0.60 EX31_RS04200 YgiQ family radical SAM protein low > 89
Enterobacter sp. TBS_079 0.20 MPMX20_01233 Leukotoxin export ATP-binding protein LtxB 0.61 MPMX20_03857 hypothetical protein low > 85
Escherichia coli Nissle 1917 0.19 ECOLIN_RS05645 microcin export peptidase/ABC transporter MchF 0.61 ECOLIN_RS17355 YgiQ family radical SAM protein — —

Not shown: 16 genomes with orthologs for PP_4927 only; 32 genomes with orthologs for PP_4872 only