Conservation of cofitness between PP_1649 and PP_1265 in Pseudomonas putida KT2440
13 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_1649 | | D-lactate dehydrogenase | 1.0 | PP_1265 | | conserved protein of unknown function | 0.15 | 10 |
Pseudomonas fluorescens FW300-N2E3 | 0.80 | AO353_02740 | | hydroxyacid dehydrogenase | 0.80 | AO353_04830 | | required for acetate efflux, together with NodT, MFP and FUSC proteins (AO353_04840, AO353_04825, and AO353_04835) (from data) | low | > 101 |
Pseudomonas fluorescens FW300-N1B4 | 0.79 | Pf1N1B4_3500 | | D-lactate dehydrogenase (EC 1.1.1.28) | 0.81 | Pf1N1B4_999 | | Na+-dependent transporters of the SNF family | low | > 87 |
Pseudomonas fluorescens FW300-N2E2 | 0.79 | Pf6N2E2_5719 | | D-lactate dehydrogenase (EC 1.1.1.28) | 0.81 | Pf6N2E2_5373 | | required for cephalothin efflux, together with NodT, MFP and FUSC proteins (Pf6N2E2_5371, Pf6N2E2_5374, Pf6N2E2_5372) (from data) | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.79 | AO356_19040 | | hydroxyacid dehydrogenase | 0.81 | AO356_17240 | | required for acetate efflux, together with NodT, MFP and FUSC proteins (AO356_17230, AO356_17245, and AO356_17235) (from data) | low | > 104 |
Pseudomonas fluorescens GW456-L13 | 0.78 | PfGW456L13_2028 | | D-lactate dehydrogenase (EC 1.1.1.28) | 0.79 | PfGW456L13_1669 | | Na+-dependent transporters of the SNF family | low | > 87 |
Pseudomonas simiae WCS417 | 0.78 | PS417_16375 | | 2-hydroxyacid dehydrogenase | 0.81 | PS417_04750 | | hypothetical protein | low | > 88 |
Pseudomonas fluorescens SBW25-INTG | 0.77 | PFLU_RS18415 | | 2-hydroxyacid dehydrogenase | 0.82 | PFLU_RS04825 | | DUF1656 domain-containing protein | low | > 109 |
Pseudomonas sp. RS175 | 0.77 | PFR28_03228 | | D-lactate dehydrogenase | 0.81 | PFR28_03571 | | Protein AaeX | low | > 88 |
Pseudomonas fluorescens SBW25 | 0.77 | PFLU_RS18415 | | 2-hydroxyacid dehydrogenase | 0.82 | PFLU_RS04825 | | DUF1656 domain-containing protein | low | > 109 |
Burkholderia phytofirmans PsJN | 0.66 | BPHYT_RS03835 | | D-lactate dehydrogenase | 0.50 | BPHYT_RS13780 | | hypothetical protein | — | — |
Paraburkholderia sabiae LMG 24235 | 0.65 | QEN71_RS26130 | | 2-hydroxyacid dehydrogenase | 0.48 | QEN71_RS05140 | | DUF1656 domain-containing protein | low | > 153 |
Paraburkholderia graminis OAS925 | 0.65 | ABIE53_000908 | | D-lactate dehydrogenase | 0.51 | ABIE53_002931 | | hypothetical protein | low | > 113 |
Herbaspirillum seropedicae SmR1 | 0.53 | HSERO_RS12550 | | D-lactate dehydrogenase | 0.39 | HSERO_RS10520 | | hypothetical protein | low | > 78 |
Not shown: 50 genomes with orthologs for PP_1649 only; 4 genomes with orthologs for PP_1265 only