Conservation of cofitness between NOLOHH_13070 and NOLOHH_16420 in Escherichia coli ECOR27

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.0 NOLOHH_16420 tcyL cystine ABC transporter permease 0.67 17
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_19590 tcyL cystine ABC transporter permease 0.58 69
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_01811 L-cystine transport system permease protein YecS low > 73
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_02290 tcyL cystine ABC transporter permease — —
Escherichia coli ECRC98 1.00 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.00 JDDGAC_00390 tcyL cystine ABC transporter permease low > 86
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_02250 tcyL cystine ABC transporter permease — —
Escherichia coli ECRC62 1.00 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.00 BNILDI_15210 tcyL cystine ABC transporter permease low > 75
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b1918 yecS predicted transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_25800 tcyL cystine ABC transporter permease low > 80
Escherichia fergusonii Becca 1.00 EFB2_01326 Protein RseC 1.00 EFB2_02028 L-cystine transport system permease protein YecS low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS10925 cystine ABC transporter permease — —
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.00 HEPCGN_04155 tcyL cystine ABC transporter permease low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.95 GFF1694 Cystine ABC transporter, permease protein low > 78
Klebsiella michiganensis M5al 0.78 BWI76_RS21340 SoxR reducing system protein RseC 0.95 BWI76_RS18355 amino acid ABC transporter permease low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.94 MPMX20_02843 L-cystine transport system permease protein YecS low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.95 EX28DRAFT_0629 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.88 IAI47_08180 cystine ABC transporter permease low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.86 EX31_RS09430 cystine ABC transporter permease low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.74 IAI46_15765 cystine ABC transporter permease low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.82 LU632_RS13765 tcyL cystine ABC transporter permease — —
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.46 HER17_RS20285 amino acid ABC transporter permease low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.45 DDA3937_RS01280 amino acid ABC transporter permease low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.45 HGI48_RS01260 amino acid ABC transporter permease — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.44 DZA65_RS01305 amino acid ABC transporter permease — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.31 SO1043 amino acid ABC transporter, permease protein (NCBI ptt file) — —
Shewanella loihica PV-4 0.21 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.31 Shew_3165 polar amino acid ABC transporter, inner membrane subunit (RefSeq) — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.33 Psest_0018 ectoine/hydroxyectoine ABC transporter, permease protein EhuC — —

Not shown: 5 genomes with orthologs for NOLOHH_13070 only; 42 genomes with orthologs for NOLOHH_16420 only