Conservation of cofitness between JDDGAC_09800 and JDDGAC_21615 in Escherichia coli ECRC98

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_09800 ldtB L,D-transpeptidase 1.0 JDDGAC_21615 mlaC phospholipid-binding protein MlaC 0.95 5
Escherichia coli BL21 1.00 ECD_00786 L,D-transpeptidase linking Lpp to murein 1.00 ECD_03057 ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02894 putative L,D-transpeptidase YbiS 1.00 OHPLBJKB_00508 putative phospholipid-binding protein MlaC low > 73
Escherichia coli ECRC102 1.00 NIAGMN_04210 ldtB L,D-transpeptidase 1.00 NIAGMN_15750 mlaC phospholipid-binding protein MlaC
Escherichia coli ECOR27 1.00 NOLOHH_22515 ldtB L,D-transpeptidase 1.00 NOLOHH_09790 mlaC phospholipid-binding protein MlaC low > 75
Escherichia coli ECRC62 1.00 BNILDI_20795 ldtB L,D-transpeptidase 1.00 BNILDI_01745 mlaC phospholipid-binding protein MlaC low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04365 L,D-transpeptidase 1.00 ECOLIN_RS18375 phospholipid-binding protein MlaC
Escherichia coli ECOR38 1.00 HEPCGN_01875 ldtB L,D-transpeptidase 1.00 HEPCGN_16865 mlaC phospholipid-binding protein MlaC 0.78 4
Escherichia coli BW25113 1.00 b0819 ybiS hypothetical protein (NCBI) 1.00 b3192 yrbC predicted ABC-type organic solvent transporter (NCBI) low > 76
Escherichia coli ECRC100 1.00 OKFHMN_06165 ldtB L,D-transpeptidase 1.00 OKFHMN_17990 mlaC phospholipid-binding protein MlaC low > 80
Escherichia coli ECRC101 1.00 MCAODC_25380 ldtB L,D-transpeptidase 1.00 MCAODC_08510 mlaC phospholipid-binding protein MlaC 0.74 23
Escherichia coli ECRC99 1.00 KEDOAH_21745 ldtB L,D-transpeptidase 1.00 KEDOAH_10160 mlaC phospholipid-binding protein MlaC
Escherichia fergusonii Becca 1.00 EFB2_03286 putative L,D-transpeptidase YbiS 1.00 EFB2_00631 Intermembrane phospholipid transport system binding protein MlaC 0.70 33
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF716 L,D-transpeptidase YbiS 0.95 GFF2936 Uncharacterized ABC transporter, auxiliary component YrbC low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS09030 transpeptidase 0.91 BWI76_RS25215 phospholipid-binding protein MlaC low > 92
Enterobacter sp. TBS_079 0.91 MPMX20_01456 putative L,D-transpeptidase YbiS 0.93 MPMX20_04098 Intermembrane phospholipid transport system binding protein MlaC low > 85
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2148 Uncharacterized protein conserved in bacteria 0.93 EX28DRAFT_3246 ABC-type transport system involved in resistance to organic solvents, auxiliary component low > 76
Serratia liquefaciens MT49 0.73 IAI46_02600 L,D-transpeptidase family protein 0.77 IAI46_22415 phospholipid-binding protein MlaC low > 86
Rahnella sp. WP5 0.73 EX31_RS10780 L,D-transpeptidase family protein 0.73 EX31_RS12450 phospholipid-binding protein MlaC low > 89
Pantoea sp. MT58 0.72 IAI47_13415 L,D-transpeptidase family protein 0.80 IAI47_17130 phospholipid-binding protein MlaC low > 76
Dickeya dadantii 3937 0.69 DDA3937_RS03570 L,D-transpeptidase family protein 0.72 DDA3937_RS01580 phospholipid-binding protein MlaC low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS03790 L,D-transpeptidase family protein 0.73 DZA65_RS01560 phospholipid-binding protein MlaC low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS03670 L,D-transpeptidase family protein 0.73 HGI48_RS01495 phospholipid-binding protein MlaC low > 71
Pectobacterium carotovorum WPP14 0.68 HER17_RS17580 L,D-transpeptidase family protein 0.78 HER17_RS20010 phospholipid-binding protein MlaC low > 75
Shewanella amazonensis SB2B 0.62 Sama_0726 ErfK/YbiS/YcfS/YnhG (RefSeq) 0.34 Sama_3078 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.60 Shewana3_0844 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) 0.35 Shewana3_0681 toluene tolerance family protein (RefSeq) 0.48 19
Shewanella oneidensis MR-1 0.59 SO3748 LysM domain protein (NCBI ptt file) 0.36 SO3951 conserved hypothetical protein (NCBI ptt file) low > 76

Not shown: 6 genomes with orthologs for JDDGAC_09800 only; 34 genomes with orthologs for JDDGAC_21615 only