Conservation of cofitness between JDDGAC_25150 and JDDGAC_20325 in Escherichia coli ECRC98

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25150 qseE two component system sensor histidine kinase QseE/GlrK 1.0 JDDGAC_20325 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase 0.97 1
Escherichia coli ECRC101 1.00 MCAODC_12015 qseE two component system sensor histidine kinase QseE/GlrK 1.00 MCAODC_07225 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 87
Escherichia coli ECRC100 1.00 OKFHMN_21485 qseE two component system sensor histidine kinase QseE/GlrK 1.00 OKFHMN_16695 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 80
Escherichia coli ECRC99 1.00 KEDOAH_06735 qseE two component system sensor histidine kinase QseE/GlrK 1.00 KEDOAH_11445 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase — —
Escherichia coli ECRC102 1.00 NIAGMN_19255 qseE two component system sensor histidine kinase QseE/GlrK 1.00 NIAGMN_14465 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14465 two component system sensor histidine kinase QseE/GlrK 0.99 ECOLIN_RS19815 16S rRNA (guanine(966)-N(2))-methyltransferase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01151 Sensor histidine kinase GlrK 0.98 OHPLBJKB_00238 Ribosomal RNA small subunit methyltransferase D low > 73
Escherichia coli BL21 1.00 ECD_02448 sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR 0.99 ECD_03314 16S rRNA m(2)G966 methyltransferase, SAM-dependent low > 61
Escherichia fergusonii Becca 1.00 EFB2_01340 Sensor histidine kinase QseE 0.99 EFB2_00351 Ribosomal RNA small subunit methyltransferase D low > 86
Escherichia coli ECOR27 1.00 NOLOHH_13160 qseE two component system sensor histidine kinase QseE/GlrK 0.99 NOLOHH_08500 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 75
Escherichia coli ECRC62 0.99 BNILDI_11960 qseE two component system sensor histidine kinase QseE/GlrK 0.99 BNILDI_03015 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 75
Escherichia coli BW25113 0.99 b2556 yfhK putative 2-component sensor protein (VIMSS) 0.99 b3465 yhhF predicted methyltransferase (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_20630 qseE two component system sensor histidine kinase QseE/GlrK 0.99 HEPCGN_15525 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF2457 Putative sensor-like histidine kinase YfhK 0.83 GFF540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) low > 78
Enterobacter sp. TBS_079 0.82 MPMX20_03425 Sensor histidine kinase QseE 0.80 MPMX20_04342 Ribosomal RNA small subunit methyltransferase D low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0094 Signal transduction histidine kinase 0.80 EX28DRAFT_4299 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD low > 76
Klebsiella michiganensis M5al 0.75 BWI76_RS21260 two-component sensor histidine kinase 0.81 BWI76_RS26405 16S rRNA (guanine(966)-N(2))-methyltransferase low > 92
Serratia liquefaciens MT49 0.72 IAI46_19470 HAMP domain-containing histidine kinase 0.68 IAI46_00920 16S rRNA (guanine(966)-N(2))-methyltransferase low > 86
Rahnella sp. WP5 0.66 EX31_RS20625 HAMP domain-containing histidine kinase 0.70 EX31_RS14835 16S rRNA (guanine(966)-N(2))-methyltransferase low > 89
Dickeya dianthicola ME23 0.66 DZA65_RS16825 HAMP domain-containing histidine kinase 0.66 DZA65_RS21770 16S rRNA (guanine(966)-N(2))-methyltransferase low > 75
Pectobacterium carotovorum WPP14 0.66 HER17_RS05915 HAMP domain-containing histidine kinase 0.71 HER17_RS00465 16S rRNA (guanine(966)-N(2))-methyltransferase low > 75
Pantoea sp. MT58 0.66 IAI47_04935 HAMP domain-containing histidine kinase 0.67 IAI47_01535 16S rRNA (guanine(966)-N(2))-methyltransferase low > 76
Dickeya dianthicola 67-19 0.65 HGI48_RS15745 HAMP domain-containing histidine kinase 0.66 HGI48_RS20760 16S rRNA (guanine(966)-N(2))-methyltransferase low > 71
Erwinia tracheiphila SCR3 0.65 LU632_RS17940 HAMP domain-containing histidine kinase 0.71 LU632_RS19285 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase low > 74
Dickeya dadantii 3937 0.65 DDA3937_RS15650 HAMP domain-containing histidine kinase 0.66 DDA3937_RS00630 16S rRNA (guanine(966)-N(2))-methyltransferase low > 74
Dechlorosoma suillum PS 0.22 Dsui_2358 signal transduction histidine kinase 0.33 Dsui_1027 RNA methyltransferase, RsmD family 0.35 35
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS23720 histidine kinase 0.31 HSERO_RS20695 methyltransferase 0.37 57
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF612 Putative sensor-like histidine kinase YfhK 0.30 GFF817 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) low > 90
Acidovorax sp. GW101-3H11 0.18 Ac3H11_4009 Putative sensor-like histidine kinase YfhK 0.29 Ac3H11_3873 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) — —

Not shown: 3 genomes with orthologs for JDDGAC_25150 only; 57 genomes with orthologs for JDDGAC_20325 only