Conservation of cofitness between JDDGAC_09800 and JDDGAC_18400 in Escherichia coli ECRC98

26 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Escherichia coli ECRC98	1.0	JDDGAC_09800	ldtB	L,D-transpeptidase	1.0	JDDGAC_18400	mioC	FMN-binding protein MioC	0.93	15
Escherichia coli HS(pFamp)R (ATCC 700891)	1.00	OHPLBJKB_02894		putative L,D-transpeptidase YbiS	0.99	OHPLBJKB_04311		Protein MioC	low	> 73
Escherichia coli BL21	1.00	ECD_00786		L,D-transpeptidase linking Lpp to murein	0.99	ECD_03626		FMN-binding protein MioC	low	> 61
Escherichia coli ECRC99	1.00	KEDOAH_21745	ldtB	L,D-transpeptidase	1.00	KEDOAH_13370	mioC	FMN-binding protein MioC	—	—
Escherichia fergusonii Becca	1.00	EFB2_03286		putative L,D-transpeptidase YbiS	1.00	EFB2_04891		Protein MioC	0.72	27
Escherichia coli BW25113	1.00	b0819	ybiS	hypothetical protein (NCBI)	0.99	b3742	mioC	flavodoxin (NCBI)	low	> 76
Escherichia coli ECOR38	1.00	HEPCGN_01875	ldtB	L,D-transpeptidase	1.00	HEPCGN_13495	mioC	FMN-binding protein MioC	low	> 87
Escherichia coli ECRC62	1.00	BNILDI_20795	ldtB	L,D-transpeptidase	1.00	BNILDI_04610	mioC	FMN-binding protein MioC	0.94	6
Escherichia coli ECRC101	1.00	MCAODC_25380	ldtB	L,D-transpeptidase	1.00	MCAODC_05285	mioC	FMN-binding protein MioC	0.74	21
Escherichia coli Nissle 1917	1.00	ECOLIN_RS04365		L,D-transpeptidase	0.99	ECOLIN_RS21520		FMN-binding protein MioC	—	—
Escherichia coli ECRC102	1.00	NIAGMN_04210	ldtB	L,D-transpeptidase	1.00	NIAGMN_12535	mioC	FMN-binding protein MioC	—	—
Escherichia coli ECRC100	1.00	OKFHMN_06165	ldtB	L,D-transpeptidase	1.00	OKFHMN_14780	mioC	FMN-binding protein MioC	low	> 80
Escherichia coli ECOR27	1.00	NOLOHH_22515	ldtB	L,D-transpeptidase	1.00	NOLOHH_06915	mioC	FMN-binding protein MioC	low	> 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	0.94	GFF716		L,D-transpeptidase YbiS	0.91	GFF1715		Flavoprotein MioC	low	> 78
Klebsiella michiganensis M5al	0.93	BWI76_RS09030		transpeptidase	0.82	BWI76_RS00240		FMN-binding protein MioC	low	> 92
Enterobacter sp. TBS_079	0.91	MPMX20_01456		putative L,D-transpeptidase YbiS	0.83	MPMX20_04625		Protein MioC	low	> 85
Enterobacter asburiae PDN3	0.90	EX28DRAFT_2148		Uncharacterized protein conserved in bacteria	0.83	EX28DRAFT_4018		Flavodoxins	low	> 76
Serratia liquefaciens MT49	0.73	IAI46_02600		L,D-transpeptidase family protein	0.73	IAI46_25105		FMN-binding protein MioC	low	> 86
Rahnella sp. WP5	0.73	EX31_RS10780		L,D-transpeptidase family protein	0.71	EX31_RS06145		FMN-binding protein MioC	low	> 89
Pantoea sp. MT58	0.72	IAI47_13415		L,D-transpeptidase family protein	0.70	IAI47_00305		FMN-binding protein MioC	—	—
Dickeya dadantii 3937	0.69	DDA3937_RS03570		L,D-transpeptidase family protein	0.72	DDA3937_RS00005		FMN-binding protein MioC	low	> 74
Dickeya dianthicola ME23	0.69	DZA65_RS03790		L,D-transpeptidase family protein	0.69	DZA65_RS22355		FMN-binding protein MioC	low	> 75
Dickeya dianthicola 67-19	0.69	HGI48_RS03670		L,D-transpeptidase family protein	0.69	HGI48_RS21375		FMN-binding protein MioC	low	> 71
Pectobacterium carotovorum WPP14	0.68	HER17_RS17580		L,D-transpeptidase family protein	0.72	HER17_RS21595		FMN-binding protein MioC	low	> 75
Shewanella amazonensis SB2B	0.62	Sama_0726		ErfK/YbiS/YcfS/YnhG (RefSeq)	0.46	Sama_0001		flavodoxin (RefSeq)	low	> 62
Shewanella sp. ANA-3	0.60	Shewana3_0844		ErfK/YbiS/YcfS/YnhG family protein (RefSeq)	0.44	Shewana3_0003		flavodoxin (RefSeq)	—	—
Shewanella oneidensis MR-1	0.59	SO3748		LysM domain protein (NCBI ptt file)	0.43	SO0001	mioC	mioC protein (NCBI ptt file)	low	> 76

Not shown: 6 genomes with orthologs for JDDGAC_09800 only; 5 genomes with orthologs for JDDGAC_18400 only