Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECRC98 | 1.0 | JDDGAC_09800 | ldtB | L,D-transpeptidase | 1.0 | JDDGAC_17970 | pldB | lysophospholipase L2 | 0.93 | 14 |
Escherichia coli ECRC62 | 1.00 | BNILDI_20795 | ldtB | L,D-transpeptidase | 1.00 | BNILDI_05055 | pldB | lysophospholipase L2 | low | > 75 |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS04365 | | L,D-transpeptidase | 1.00 | ECOLIN_RS21960 | | lysophospholipase L2 | — | — |
Escherichia coli BW25113 | 1.00 | b0819 | ybiS | hypothetical protein (NCBI) | 1.00 | b3825 | pldB | lysophospholipase L(2) (NCBI) | low | > 76 |
Escherichia coli BL21 | 1.00 | ECD_00786 | | L,D-transpeptidase linking Lpp to murein | 1.00 | ECD_03704 | | lysophospholipase L2 | low | > 61 |
Escherichia coli ECRC101 | 1.00 | MCAODC_25380 | ldtB | L,D-transpeptidase | 1.00 | MCAODC_04850 | pldB | lysophospholipase L2 | low | > 87 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02894 | | putative L,D-transpeptidase YbiS | 1.00 | OHPLBJKB_04226 | | Lysophospholipase L2 | low | > 73 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_22515 | ldtB | L,D-transpeptidase | 1.00 | NOLOHH_06475 | pldB | lysophospholipase L2 | low | > 75 |
Escherichia fergusonii Becca | 1.00 | EFB2_03286 | | putative L,D-transpeptidase YbiS | 1.00 | EFB2_04812 | | Lysophospholipase L2 | low | > 86 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_01875 | ldtB | L,D-transpeptidase | 1.00 | HEPCGN_13045 | pldB | lysophospholipase L2 | low | > 87 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_21745 | ldtB | L,D-transpeptidase | 1.00 | KEDOAH_13805 | pldB | lysophospholipase L2 | — | — |
Escherichia coli ECRC102 | 1.00 | NIAGMN_04210 | ldtB | L,D-transpeptidase | 1.00 | NIAGMN_12100 | pldB | lysophospholipase L2 | — | — |
Escherichia coli ECRC100 | 1.00 | OKFHMN_06165 | ldtB | L,D-transpeptidase | 1.00 | OKFHMN_14345 | pldB | lysophospholipase L2 | low | > 80 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.94 | GFF716 | | L,D-transpeptidase YbiS | 0.84 | GFF251 | | Lysophospholipase L2 (EC 3.1.1.5) | low | > 78 |
Klebsiella michiganensis M5al | 0.93 | BWI76_RS09030 | | transpeptidase | 0.80 | BWI76_RS01260 | | lysophospholipase L2 | low | > 92 |
Enterobacter sp. TBS_079 | 0.91 | MPMX20_01456 | | putative L,D-transpeptidase YbiS | 0.83 | MPMX20_04455 | | Lysophospholipase L2 | low | > 85 |
Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_2148 | | Uncharacterized protein conserved in bacteria | 0.82 | EX28DRAFT_4490 | | Lysophospholipase | low | > 76 |
Serratia liquefaciens MT49 | 0.73 | IAI46_02600 | | L,D-transpeptidase family protein | 0.63 | IAI46_00785 | | lysophospholipase L2 | low | > 86 |
Rahnella sp. WP5 | 0.73 | EX31_RS10780 | | L,D-transpeptidase family protein | 0.61 | EX31_RS15225 | | lysophospholipase L2 | low | > 89 |
Pantoea sp. MT58 | 0.72 | IAI47_13415 | | L,D-transpeptidase family protein | 0.62 | IAI47_18340 | | lysophospholipase L2 | low | > 76 |
Dickeya dadantii 3937 | 0.69 | DDA3937_RS03570 | | L,D-transpeptidase family protein | 0.58 | DDA3937_RS19830 | | lysophospholipase L2 | low | > 74 |
Dickeya dianthicola ME23 | 0.69 | DZA65_RS03790 | | L,D-transpeptidase family protein | 0.58 | DZA65_RS21030 | | lysophospholipase L2 | low | > 75 |
Dickeya dianthicola 67-19 | 0.69 | HGI48_RS03670 | | L,D-transpeptidase family protein | 0.57 | HGI48_RS19985 | | lysophospholipase L2 | low | > 71 |
Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS17580 | | L,D-transpeptidase family protein | 0.55 | HER17_RS01410 | | lysophospholipase L2 | low | > 75 |
Shewanella amazonensis SB2B | 0.62 | Sama_0726 | | ErfK/YbiS/YcfS/YnhG (RefSeq) | 0.27 | Sama_0083 | | alpha/beta hydrolase fold (RefSeq) | 0.25 | 32 |
Shewanella sp. ANA-3 | 0.60 | Shewana3_0844 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | 0.31 | Shewana3_4119 | | alpha/beta hydrolase fold (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.59 | SO3748 | | LysM domain protein (NCBI ptt file) | 0.30 | SO4733 | lypA | lysophospholipase L2 (NCBI ptt file) | low | > 76 |
Not shown: 6 genomes with orthologs for JDDGAC_09800 only; 15 genomes with orthologs for JDDGAC_17970 only