Conservation of cofitness between JDDGAC_23235 and JDDGAC_14395 in Escherichia coli ECRC98

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_23235 idi isopentenyl-diphosphate Delta-isomerase 1.0 JDDGAC_14395 rapA RNA polymerase-associated protein RapA 0.83 8
Escherichia coli ECOR27 1.00 NOLOHH_11520 idi isopentenyl-diphosphate Delta-isomerase 1.00 NOLOHH_03145 rapA RNA polymerase-associated protein RapA low > 75
Escherichia coli ECRC99 1.00 KEDOAH_08545 idi isopentenyl-diphosphate Delta-isomerase 1.00 KEDOAH_17355 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC101 1.00 MCAODC_10115 idi isopentenyl-diphosphate Delta-isomerase 1.00 MCAODC_01315 rapA RNA polymerase-associated protein RapA low > 87
Escherichia coli ECRC100 1.00 OKFHMN_19595 idi isopentenyl-diphosphate Delta-isomerase 1.00 OKFHMN_10800 rapA RNA polymerase-associated protein RapA low > 80
Escherichia coli ECRC102 1.00 NIAGMN_17360 idi isopentenyl-diphosphate Delta-isomerase 1.00 NIAGMN_08650 rapA RNA polymerase-associated protein RapA — —
Escherichia coli BL21 0.99 ECD_02721 isopentenyl diphosphate isomerase 1.00 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase low > 61
Escherichia coli ECRC62 0.98 BNILDI_10050 idi isopentenyl-diphosphate Delta-isomerase 1.00 BNILDI_08460 rapA RNA polymerase-associated protein RapA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_00826 Isopentenyl-diphosphate Delta-isomerase 1.00 OHPLBJKB_03599 RNA polymerase-associated protein RapA low > 73
Escherichia coli BW25113 0.96 b2889 idi isopentenyl-diphosphate delta-isomerase (NCBI) 1.00 b0059 hepA ATP-dependent helicase HepA (NCBI) low > 76
Escherichia coli Nissle 1917 0.95 ECOLIN_RS16100 isopentenyl-diphosphate Delta-isomerase 1.00 ECOLIN_RS00315 RNA polymerase-associated protein RapA low > 55
Escherichia fergusonii Becca 0.95 EFB2_01012 Isopentenyl-diphosphate Delta-isomerase 1.00 EFB2_03986 RNA polymerase-associated protein RapA low > 86
Escherichia coli ECOR38 0.94 HEPCGN_18885 idi isopentenyl-diphosphate Delta-isomerase 1.00 HEPCGN_08790 rapA RNA polymerase-associated protein RapA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2986 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 0.94 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 78
Klebsiella michiganensis M5al 0.71 BWI76_RS23790 isopentenyl-diphosphate Delta-isomerase 0.92 BWI76_RS04570 RNA polymerase-associated protein RapA — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2940 isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 0.92 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_03748 Isopentenyl-diphosphate Delta-isomerase 0.92 MPMX20_00753 RNA polymerase-associated protein RapA low > 85
Rahnella sp. WP5 0.51 EX31_RS02215 isopentenyl-diphosphate Delta-isomerase 0.80 EX31_RS03745 RNA polymerase-associated protein RapA low > 89
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS08560 isopentenyl-diphosphate Delta-isomerase 0.33 LRK54_RS02885 RNA polymerase-associated protein RapA low > 59
Rhodanobacter denitrificans MT42 0.28 LRK55_RS08325 isopentenyl-diphosphate Delta-isomerase 0.33 LRK55_RS02635 RNA polymerase-associated protein RapA low > 63
Pectobacterium carotovorum WPP14 0.25 HER17_RS13245 isopentenyl-diphosphate Delta-isomerase 0.78 HER17_RS02990 RNA polymerase-associated protein RapA low > 75
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_19625 isopentenyl-diphosphate delta-isomerase 0.48 AO353_17155 RNA polymerase-associated protein RapA low > 101
Serratia liquefaciens MT49 0.23 IAI46_11275 isopentenyl-diphosphate Delta-isomerase 0.84 IAI46_03275 RNA polymerase-associated protein RapA low > 86
Pantoea sp. MT58 0.23 IAI47_13340 isopentenyl-diphosphate Delta-isomerase 0.84 IAI47_16055 RNA polymerase-associated protein RapA low > 76

Not shown: 3 genomes with orthologs for JDDGAC_23235 only; 27 genomes with orthologs for JDDGAC_14395 only