Conservation of cofitness between JDDGAC_28300 and JDDGAC_04055 in Escherichia coli ECRC98

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 JDDGAC_04055 potB spermidine/putrescine ABC transporter permease 0.65 3
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_25700 potB spermidine/putrescine ABC transporter permease — —
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_26875 potB spermidine/putrescine ABC transporter permease — —
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 MCAODC_16375 potB spermidine/putrescine ABC transporter permease low > 87
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_01565 potB spermidine/putrescine ABC transporter permease low > 80
Escherichia coli ECOR27 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NOLOHH_19240 potB spermidine/putrescine ABC transporter permease — —
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 1.00 ECD_01399 putative ABC transporter permease 0.57 50
Escherichia coli ECRC62 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 BNILDI_17690 potB spermidine/putrescine ABC transporter permease low > 75
Escherichia coli BW25113 0.99 b2076 mdtC multidrug efflux system, subunit C (NCBI) 1.00 b1442 ydcU predicted spermidine/putrescine transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01628 Multidrug resistance protein MdtC 1.00 OHPLBJKB_02273 Inner membrane ABC transporter permease protein YdcU low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 HEPCGN_26245 potB spermidine/putrescine ABC transporter permease low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 1.00 ECOLIN_RS08310 ABC transporter permease — —
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 0.99 EFB2_02542 Inner membrane ABC transporter permease protein YdcU low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump 0.87 EX28DRAFT_1028 ABC-type spermidine/putrescine transport system, permease component I low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03062 Multidrug resistance protein MdtC 0.86 MPMX20_02422 Inner membrane ABC transporter permease protein YdcU low > 85
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.85 BWI76_RS13415 spermidine/putrescine ABC transporter permease low > 92
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.81 IAI46_19425 ABC transporter permease low > 86
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22900 acriflavine resistance protein B 0.78 AO353_04280 spermidine/putrescine ABC transporter permease low > 101
Pseudomonas sp. S08-1 0.55 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.75 OH686_06915 ABC transporter permease protein YdcU low > 80
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.79 PfGW456L13_4764 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) low > 87
Pseudomonas fluorescens SBW25 0.53 PFLU_RS13435 MMPL family transporter 0.79 PFLU_RS05990 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS13435 MMPL family transporter 0.79 PFLU_RS05990 ABC transporter permease low > 109
Pseudomonas simiae WCS417 0.52 PS417_12750 acriflavine resistance protein B 0.79 PS417_05930 spermidine/putrescine ABC transporter permease low > 88
Pseudomonas putida KT2440 0.52 PP_3583 multidrug efflux transport system - membrane subunit 0.77 PP_1483 polyamine ABC transporter, permease protein low > 96
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.79 Pf6N2E2_3129 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_25880 acriflavine resistance protein B 0.79 AO356_06305 spermidine/putrescine ABC transporter permease low > 104
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.79 PFR28_00345 Inner membrane ABC transporter permease protein YdcU low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF488 RND multidrug efflux transporter; Acriflavin resistance protein 0.55 GFF283 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) low > 90
Rhizobium sp. OAE497 0.38 ABIE40_RS05760 efflux RND transporter permease subunit 0.60 ABIE40_RS16905 ABC transporter permease low > 107
Sinorhizobium meliloti 1021 0.23 SMc01457 transport transmembrane protein 0.60 SMc01654 ABC transporter permease low > 103

Not shown: 34 genomes with orthologs for JDDGAC_28300 only; 1 genomes with orthologs for JDDGAC_04055 only