Conservation of cofitness between IAI46_23250 and IAI46_20115 in Serratia liquefaciens MT49

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_23250 topoisomerase DNA-binding C4 zinc finger domain-containing protein 1.0 IAI46_20115 YaeQ family protein 0.49 3
Rahnella sp. WP5 0.79 EX31_RS15960 hypothetical protein 0.78 EX31_RS12920 YaeQ family protein low > 89
Klebsiella michiganensis M5al 0.78 BWI76_RS25655 DNA topoisomerase type IA zn finger domain-containing protein 0.64 BWI76_RS05325 hypothetical protein low > 92
Pectobacterium carotovorum WPP14 0.77 HER17_RS02240 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.76 HER17_RS16230 YaeQ family protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2395 Similar to C-terminal Zn-finger domain of DNA topoisomerase I 0.68 GFF30 YaeQ protein low > 78
Dickeya dadantii 3937 0.76 DDA3937_RS22495 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.75 DDA3937_RS05220 YaeQ family protein low > 74
Dickeya dianthicola ME23 0.76 DZA65_RS20325 hypothetical protein 0.76 DZA65_RS05560 YaeQ family protein low > 75
Escherichia coli ECOR38 0.76 HEPCGN_16375 yrdD Uncharacterized protein YrdD 0.67 HEPCGN_08055 yaeQ Uncharacterized protein YaeQ low > 85
Escherichia coli ECRC62 0.76 BNILDI_02175 yrdD Uncharacterized protein YrdD 0.67 BNILDI_09225 yaeQ Uncharacterized protein YaeQ — —
Escherichia fergusonii Becca 0.76 EFB2_00540 DNA topoisomerase 1 0.67 EFB2_03853 putative protein YaeQ low > 86
Escherichia coli Nissle 1917 0.76 ECOLIN_RS18850 type I DNA topoisomerase 0.67 ECOLIN_RS01035 YaeQ family protein low > 52
Dickeya dianthicola 67-19 0.76 HGI48_RS19200 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.76 HGI48_RS05220 YaeQ family protein low > 71
Escherichia coli ECOR27 0.76 NOLOHH_09345 yrdD Uncharacterized protein YrdD 0.67 NOLOHH_02445 yaeQ Uncharacterized protein YaeQ low > 57
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0044 Zn-finger domain associated with topoisomerase type I 0.68 EX28DRAFT_3779 Uncharacterized protein conserved in bacteria low > 76
Escherichia coli BW25113 0.75 b3283 yrdD predicted DNA topoisomerase (NCBI) 0.67 b0190 yaeQ hypothetical protein (NCBI) 0.38 5
Enterobacter sp. TBS_079 0.75 MPMX20_04191 DNA topoisomerase 1 0.67 MPMX20_00875 putative protein YaeQ low > 85
Escherichia coli ECRC102 0.75 NIAGMN_15315 yrdD Uncharacterized protein YrdD 0.58 NIAGMN_07950 yaeQ Uncharacterized protein YaeQ — —
Escherichia coli ECRC99 0.75 KEDOAH_10595 yrdD Uncharacterized protein YrdD 0.67 KEDOAH_18055 yaeQ Uncharacterized protein YaeQ — —
Escherichia coli ECRC98 0.75 JDDGAC_21175 yrdD Uncharacterized protein YrdD 0.67 JDDGAC_13695 yaeQ Uncharacterized protein YaeQ — —
Escherichia coli BL21 0.75 ECD_03134 ssDNA-binding protein, function unknown 0.67 ECD_00189 PDDEXK superfamily protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00420 DNA topoisomerase 1 0.67 OHPLBJKB_03472 putative protein YaeQ low > 73
Escherichia coli ECRC101 0.75 MCAODC_08075 yrdD Uncharacterized protein YrdD 0.67 MCAODC_00615 yaeQ Uncharacterized protein YaeQ — —
Escherichia coli ECRC101 0.75 OKFHMN_17555 yrdD Uncharacterized protein YrdD 0.67 OKFHMN_10100 yaeQ Uncharacterized protein YaeQ — —
Erwinia tracheiphila SCR3 0.72 LU632_RS22455 topoisomerase DNA-binding C4 zinc finger domain-containing protein 0.70 LU632_RS19855 YaeQ family protein low > 74
Shewanella sp. ANA-3 0.42 Shewana3_0039 DNA topoisomerase type IA Zn finger domain-containing protein (RefSeq) 0.47 Shewana3_1442 YaeQ family protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.42 MIT1002_00024 DNA topoisomerase 1 0.47 MIT1002_02949 YaeQ protein low > 70
Shewanella oneidensis MR-1 0.41 SO0036 topoisomerase DNA-binding C4 zinc finger domain protein (NCBI ptt file) 0.46 SO3107 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.41 Sama_0048 topoisomerase DNA-binding C4 zinc finger domain-containing protein (RefSeq) 0.33 Sama_2186 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.40 Shew_3731 DNA topoisomerase type IA Zn finger domain-containing protein (RefSeq) 0.47 Shew_2331 YaeQ family protein (RefSeq) — —

Not shown: 2 genomes with orthologs for IAI46_23250 only; 35 genomes with orthologs for IAI46_20115 only