Conservation of cofitness between HSERO_RS08070 and HSERO_RS23720 in Herbaspirillum seropedicae SmR1

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS08070 endonuclease IV 1.0 HSERO_RS23720 histidine kinase 0.35 10
Pectobacterium carotovorum WPP14 0.73 HER17_RS10860 endonuclease III 0.18 HER17_RS05915 HAMP domain-containing histidine kinase low > 75
Escherichia coli BL21 0.72 ECD_01603 DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) 0.20 ECD_02448 sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR — —
Escherichia coli ECOR27 0.72 NOLOHH_18045 nth endonuclease III 0.20 NOLOHH_13160 qseE two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli BW25113 0.72 b1633 nth DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) 0.20 b2556 yfhK putative 2-component sensor protein (VIMSS) low > 76
Escherichia coli Nissle 1917 0.72 ECOLIN_RS09110 endonuclease III 0.20 ECOLIN_RS14465 two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_02093 Endonuclease III 0.20 OHPLBJKB_01151 Sensor histidine kinase GlrK low > 73
Escherichia coli ECOR38 0.72 HEPCGN_05910 nth endonuclease III 0.20 HEPCGN_20630 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli ECRC62 0.72 BNILDI_16835 nth endonuclease III 0.20 BNILDI_11960 qseE two component system sensor histidine kinase QseE/GlrK low > 75
Rahnella sp. WP5 0.72 EX31_RS06590 endonuclease III 0.22 EX31_RS20625 HAMP domain-containing histidine kinase low > 89
Enterobacter sp. TBS_079 0.71 MPMX20_02005 Endonuclease III 0.19 MPMX20_03425 Sensor histidine kinase QseE low > 85
Erwinia tracheiphila SCR3 0.71 LU632_RS11305 nth endonuclease III 0.20 LU632_RS17940 HAMP domain-containing histidine kinase low > 74
Escherichia fergusonii Becca 0.71 EFB2_02359 Endonuclease III 0.20 EFB2_01340 Sensor histidine kinase QseE low > 86
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1629 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-) 0.19 EX28DRAFT_0094 Signal transduction histidine kinase low > 76
Escherichia coli ECRC102 0.71 NIAGMN_00540 nth endonuclease III 0.20 NIAGMN_19255 qseE two component system sensor histidine kinase QseE/GlrK — —
Pantoea sp. MT58 0.71 IAI47_10475 endonuclease III 0.21 IAI47_04935 HAMP domain-containing histidine kinase low > 76
Escherichia coli ECRC98 0.71 JDDGAC_02115 nth endonuclease III 0.20 JDDGAC_25150 qseE two component system sensor histidine kinase QseE/GlrK low > 86
Serratia liquefaciens MT49 0.71 IAI46_11455 endonuclease III 0.22 IAI46_19470 HAMP domain-containing histidine kinase low > 86
Escherichia coli ECRC99 0.71 KEDOAH_00580 nth endonuclease III 0.20 KEDOAH_06735 qseE two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli ECRC101 0.71 MCAODC_17885 nth endonuclease III 0.20 MCAODC_12015 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli ECRC100 0.71 OKFHMN_27525 nth endonuclease III 0.20 OKFHMN_21485 qseE two component system sensor histidine kinase QseE/GlrK low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3641 Endonuclease III (EC 4.2.99.18) 0.19 GFF2457 Putative sensor-like histidine kinase YfhK low > 78
Dickeya dianthicola ME23 0.71 DZA65_RS11025 endonuclease III 0.19 DZA65_RS16825 HAMP domain-containing histidine kinase low > 75
Klebsiella michiganensis M5al 0.71 BWI76_RS16385 endonuclease III 0.20 BWI76_RS21260 two-component sensor histidine kinase — —
Dechlorosoma suillum PS 0.71 Dsui_2985 endonuclease III 0.30 Dsui_2358 signal transduction histidine kinase low > 51
Dickeya dadantii 3937 0.70 DDA3937_RS10545 endonuclease III 0.20 DDA3937_RS15650 HAMP domain-containing histidine kinase low > 74
Dickeya dianthicola 67-19 0.70 HGI48_RS10545 endonuclease III 0.19 HGI48_RS15745 HAMP domain-containing histidine kinase low > 71
Variovorax sp. OAS795 0.68 ABID97_RS17315 endonuclease III 0.39 ABID97_RS06470 ATP-binding protein — —
Variovorax sp. SCN45 0.68 GFF418 Endonuclease III (EC 4.2.99.18) 0.40 GFF7321 Sensor histidine kinase GlrK low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF4003 Endonuclease III (EC 4.2.99.18) 0.46 GFF612 Putative sensor-like histidine kinase YfhK low > 90
Acidovorax sp. GW101-3H11 0.66 Ac3H11_1010 Endonuclease III (EC 4.2.99.18) 0.36 Ac3H11_4009 Putative sensor-like histidine kinase YfhK low > 79
Alteromonas macleodii MIT1002 0.32 MIT1002_01251 Endonuclease III 0.13 MIT1002_01324 Sensor histidine kinase QseE low > 70

Not shown: 63 genomes with orthologs for HSERO_RS08070 only; 0 genomes with orthologs for HSERO_RS23720 only