Conservation of cofitness between HSERO_RS07610 and HSERO_RS23720 in Herbaspirillum seropedicae SmR1

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07610 fumarate hydratase 1.0 HSERO_RS23720 histidine kinase 0.38 14
Enterobacter asburiae PDN3 0.72 EX28DRAFT_1608 fumarase, class II (EC 4.2.1.2) 0.19 EX28DRAFT_0094 Signal transduction histidine kinase low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_02022 Fumarate hydratase class II 0.19 MPMX20_03425 Sensor histidine kinase QseE low > 85
Klebsiella michiganensis M5al 0.72 BWI76_RS16270 fumarate hydratase, class II 0.20 BWI76_RS21260 two-component sensor histidine kinase low > 92
Variovorax sp. SCN45 0.72 GFF479 Fumarate hydratase class II (EC 4.2.1.2) 0.40 GFF7321 Sensor histidine kinase GlrK low > 127
Dickeya dianthicola ME23 0.71 DZA65_RS11125 class II fumarate hydratase 0.19 DZA65_RS16825 HAMP domain-containing histidine kinase low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS10655 class II fumarate hydratase 0.20 DDA3937_RS15650 HAMP domain-containing histidine kinase low > 74
Rahnella sp. WP5 0.71 EX31_RS06965 class II fumarate hydratase 0.22 EX31_RS20625 HAMP domain-containing histidine kinase low > 89
Dickeya dianthicola 67-19 0.71 HGI48_RS10655 class II fumarate hydratase 0.19 HGI48_RS15745 HAMP domain-containing histidine kinase low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_02115 Fumarate hydratase class II 0.20 OHPLBJKB_01151 Sensor histidine kinase GlrK low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF1806 Fumarate hydratase class II (EC 4.2.1.2) 0.19 GFF2457 Putative sensor-like histidine kinase YfhK low > 78
Pectobacterium carotovorum WPP14 0.71 HER17_RS10755 class II fumarate hydratase 0.18 HER17_RS05915 HAMP domain-containing histidine kinase 0.76 20
Acidovorax sp. GW101-3H11 0.71 Ac3H11_943 Fumarate hydratase class II (EC 4.2.1.2) 0.36 Ac3H11_4009 Putative sensor-like histidine kinase YfhK low > 79
Serratia liquefaciens MT49 0.71 IAI46_11655 class II fumarate hydratase 0.22 IAI46_19470 HAMP domain-containing histidine kinase low > 86
Variovorax sp. OAS795 0.71 ABID97_RS17545 class II fumarate hydratase 0.39 ABID97_RS06470 ATP-binding protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.70 GFF4101 Fumarate hydratase class II (EC 4.2.1.2) 0.46 GFF612 Putative sensor-like histidine kinase YfhK low > 90
Pantoea sp. MT58 0.70 IAI47_10335 class II fumarate hydratase 0.21 IAI47_04935 HAMP domain-containing histidine kinase low > 76
Escherichia coli ECRC100 0.70 OKFHMN_27650 fumC class II fumarate hydratase 0.20 OKFHMN_21485 qseE two component system sensor histidine kinase QseE/GlrK low > 80
Escherichia coli ECRC98 0.70 JDDGAC_02240 fumC class II fumarate hydratase 0.20 JDDGAC_25150 qseE two component system sensor histidine kinase QseE/GlrK low > 86
Escherichia coli ECRC102 0.70 NIAGMN_00425 fumC class II fumarate hydratase 0.20 NIAGMN_19255 qseE two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli ECRC101 0.70 MCAODC_17760 fumC class II fumarate hydratase 0.20 MCAODC_12015 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli ECRC62 0.70 BNILDI_16945 fumC class II fumarate hydratase 0.20 BNILDI_11960 qseE two component system sensor histidine kinase QseE/GlrK low > 75
Escherichia coli ECRC99 0.70 KEDOAH_00455 fumC class II fumarate hydratase 0.20 KEDOAH_06735 qseE two component system sensor histidine kinase QseE/GlrK — —
Escherichia fergusonii Becca 0.70 EFB2_02381 Fumarate hydratase class II 0.20 EFB2_01340 Sensor histidine kinase QseE low > 86
Escherichia coli BW25113 0.70 b1611 fumC fumarate hydratase (NCBI) 0.20 b2556 yfhK putative 2-component sensor protein (VIMSS) low > 76
Escherichia coli ECOR27 0.70 NOLOHH_18155 fumC class II fumarate hydratase 0.20 NOLOHH_13160 qseE two component system sensor histidine kinase QseE/GlrK low > 75
Escherichia coli Nissle 1917 0.70 ECOLIN_RS08995 class II fumarate hydratase 0.20 ECOLIN_RS14465 two component system sensor histidine kinase QseE/GlrK — —
Dechlorosoma suillum PS 0.70 Dsui_0926 fumarate hydratase, class II 0.30 Dsui_2358 signal transduction histidine kinase low > 51
Escherichia coli ECOR38 0.70 HEPCGN_06025 fumC class II fumarate hydratase 0.20 HEPCGN_20630 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli BL21 0.70 ECD_01580 fumarate hydratase (fumarase C),aerobic Class II 0.20 ECD_02448 sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR — —
Erwinia tracheiphila SCR3 0.69 LU632_RS12335 fumC class II fumarate hydratase 0.20 LU632_RS17940 HAMP domain-containing histidine kinase low > 74
Alteromonas macleodii MIT1002 0.39 MIT1002_03167 Fumarate hydratase class II 0.13 MIT1002_01324 Sensor histidine kinase QseE low > 70

Not shown: 66 genomes with orthologs for HSERO_RS07610 only; 0 genomes with orthologs for HSERO_RS23720 only