Conservation of cofitness between HSERO_RS03475 and HSERO_RS23720 in Herbaspirillum seropedicae SmR1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03475 NUDIX hydrolase 1.0 HSERO_RS23720 histidine kinase 0.37 3
Acidovorax sp. GW101-3H11 0.60 Ac3H11_4361 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.36 Ac3H11_4009 Putative sensor-like histidine kinase YfhK low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF2602 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.46 GFF612 Putative sensor-like histidine kinase YfhK low > 90
Variovorax sp. SCN45 0.58 GFF4911 Nudix-like NDP and NTP phosphohydrolase NudJ 0.40 GFF7321 Sensor histidine kinase GlrK low > 127
Variovorax sp. OAS795 0.55 ABID97_RS04420 NUDIX hydrolase 0.39 ABID97_RS06470 ATP-binding protein — —
Dechlorosoma suillum PS 0.52 Dsui_3338 Zn-finger containing NTP pyrophosphohydrolase 0.30 Dsui_2358 signal transduction histidine kinase low > 51
Rahnella sp. WP5 0.29 EX31_RS24580 NUDIX hydrolase 0.22 EX31_RS20625 HAMP domain-containing histidine kinase low > 89
Escherichia coli Nissle 1917 0.24 ECOLIN_RS06630 phosphatase NudJ 0.20 ECOLIN_RS14465 two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli ECRC100 0.24 OKFHMN_00750 nudJ phosphatase NudJ 0.20 OKFHMN_21485 qseE two component system sensor histidine kinase QseE/GlrK low > 80
Escherichia fergusonii Becca 0.24 EFB2_02841 Phosphatase NudJ 0.20 EFB2_01340 Sensor histidine kinase QseE low > 86
Escherichia coli ECOR27 0.24 NOLOHH_20895 nudJ phosphatase NudJ 0.20 NOLOHH_13160 qseE two component system sensor histidine kinase QseE/GlrK low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_02534 Phosphatase NudJ 0.20 OHPLBJKB_01151 Sensor histidine kinase GlrK low > 73
Escherichia coli ECRC102 0.24 NIAGMN_24895 nudJ phosphatase NudJ 0.20 NIAGMN_19255 qseE two component system sensor histidine kinase QseE/GlrK — —
Escherichia coli ECRC98 0.24 JDDGAC_06615 nudJ phosphatase NudJ 0.20 JDDGAC_25150 qseE two component system sensor histidine kinase QseE/GlrK low > 86
Escherichia coli ECOR38 0.24 HEPCGN_24225 nudJ phosphatase NudJ 0.20 HEPCGN_20630 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli ECRC62 0.24 BNILDI_19060 nudJ phosphatase NudJ 0.20 BNILDI_11960 qseE two component system sensor histidine kinase QseE/GlrK low > 75
Escherichia coli ECRC101 0.24 MCAODC_22335 nudJ phosphatase NudJ 0.20 MCAODC_12015 qseE two component system sensor histidine kinase QseE/GlrK low > 87
Escherichia coli BL21 0.24 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase 0.20 ECD_02448 sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR — —
Escherichia coli BW25113 0.24 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) 0.20 b2556 yfhK putative 2-component sensor protein (VIMSS) low > 76
Escherichia coli ECRC99 0.24 KEDOAH_24835 nudJ phosphatase NudJ 0.20 KEDOAH_06735 qseE two component system sensor histidine kinase QseE/GlrK — —
Enterobacter sp. TBS_079 0.24 MPMX20_01818 Phosphatase NudJ 0.19 MPMX20_03425 Sensor histidine kinase QseE low > 85
Klebsiella michiganensis M5al 0.23 BWI76_RS11320 NUDIX hydrolase 0.20 BWI76_RS21260 two-component sensor histidine kinase — —
Serratia liquefaciens MT49 0.23 IAI46_10445 NUDIX hydrolase 0.22 IAI46_19470 HAMP domain-containing histidine kinase low > 86
Enterobacter asburiae PDN3 0.23 EX28DRAFT_1796 ADP-ribose pyrophosphatase 0.19 EX28DRAFT_0094 Signal transduction histidine kinase low > 76
Erwinia tracheiphila SCR3 0.23 LU632_RS14570 NUDIX hydrolase 0.20 LU632_RS17940 HAMP domain-containing histidine kinase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB 0.19 GFF2457 Putative sensor-like histidine kinase YfhK low > 78
Pectobacterium carotovorum WPP14 0.22 HER17_RS11620 NUDIX hydrolase 0.18 HER17_RS05915 HAMP domain-containing histidine kinase low > 75
Dickeya dadantii 3937 0.22 DDA3937_RS11480 NUDIX hydrolase 0.20 DDA3937_RS15650 HAMP domain-containing histidine kinase low > 74
Dickeya dianthicola ME23 0.22 DZA65_RS11860 NUDIX hydrolase 0.19 DZA65_RS16825 HAMP domain-containing histidine kinase low > 75
Dickeya dianthicola 67-19 0.22 HGI48_RS11525 NUDIX hydrolase 0.19 HGI48_RS15745 HAMP domain-containing histidine kinase low > 71
Pantoea sp. MT58 0.21 IAI47_11910 NUDIX hydrolase 0.21 IAI47_04935 HAMP domain-containing histidine kinase low > 76

Not shown: 37 genomes with orthologs for HSERO_RS03475 only; 1 genomes with orthologs for HSERO_RS23720 only