Conservation of cofitness between HSERO_RS16335 and HSERO_RS23710 in Herbaspirillum seropedicae SmR1

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16335 guanine deaminase 1.0 HSERO_RS23710 response regulator GlrR 0.26 16
Variovorax sp. SCN45 0.52 GFF1914 Guanine deaminase (EC 3.5.4.3) 0.71 GFF7323 Transcriptional response regulatory protein GlrR low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF213 Guanine deaminase (EC 3.5.4.3) 0.70 GFF610 Putative sensory histidine kinase YfhA low > 90
Variovorax sp. OAS795 0.52 ABID97_RS22045 guanine deaminase 0.71 ABID97_RS06460 sigma 54-interacting transcriptional regulator low > 91
Escherichia coli ECOR38 0.50 HEPCGN_18915 guaD guanine deaminase 0.54 HEPCGN_20640 qseF two-component system response regulator QseF/GlrR low > 87
Escherichia coli BL21 0.50 ECD_02716 guanine deaminase 0.54 ECD_02446 response regulator regulating glmY sRNA in two-component system with sensor protein GlrK low > 61
Escherichia coli ECRC102 0.50 NIAGMN_17395 guaD guanine deaminase 0.54 NIAGMN_19265 qseF two-component system response regulator QseF/GlrR — —
Escherichia coli ECRC98 0.50 JDDGAC_23270 guaD guanine deaminase 0.54 JDDGAC_25160 qseF two-component system response regulator QseF/GlrR low > 86
Escherichia coli ECRC99 0.50 KEDOAH_08510 guaD guanine deaminase 0.54 KEDOAH_06725 qseF two-component system response regulator QseF/GlrR — —
Escherichia coli BW25113 0.50 b2883 guaD guanine deaminase (NCBI) 0.54 b2554 yfhA predicted DNA-binding response regulator in two-component system (NCBI) low > 76
Escherichia coli ECRC100 0.50 OKFHMN_19625 guaD guanine deaminase 0.54 OKFHMN_21495 qseF two-component system response regulator QseF/GlrR low > 80
Escherichia coli ECOR27 0.50 NOLOHH_11555 guaD guanine deaminase 0.54 NOLOHH_13170 qseF two-component system response regulator QseF/GlrR low > 75
Escherichia coli ECRC62 0.50 BNILDI_10080 guaD guanine deaminase 0.54 BNILDI_11970 qseF two-component system response regulator QseF/GlrR low > 75
Escherichia coli Nissle 1917 0.50 ECOLIN_RS16065 guanine deaminase 0.54 ECOLIN_RS14455 two-component system response regulator GlrR low > 55
Escherichia fergusonii Becca 0.50 EFB2_01018 Guanine deaminase 0.54 EFB2_01342 Transcriptional regulatory protein QseF low > 86
Escherichia coli ECRC101 0.50 MCAODC_10150 guaD guanine deaminase 0.54 MCAODC_12025 qseF two-component system response regulator QseF/GlrR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00832 Guanine deaminase 0.54 OHPLBJKB_01153 Transcriptional regulatory protein GlrR low > 73
Dickeya dianthicola ME23 0.50 DZA65_RS12690 guanine deaminase 0.55 DZA65_RS16815 two-component system response regulator GlrR low > 75
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1117 Guanine deaminase (EC 3.5.4.3) 0.69 Ac3H11_4011 Putative sensory histidine kinase YfhA low > 79
Dickeya dadantii 3937 0.49 DDA3937_RS12145 guanine deaminase 0.55 DDA3937_RS15640 two-component system response regulator GlrR low > 74
Dickeya dianthicola 67-19 0.49 HGI48_RS12240 guanine deaminase 0.56 HGI48_RS15735 two-component system response regulator GlrR low > 71
Serratia liquefaciens MT49 0.46 IAI46_11780 guanine deaminase 0.56 IAI46_19460 two-component system response regulator GlrR low > 86
Klebsiella michiganensis M5al 0.46 BWI76_RS10520 guanine deaminase 0.55 BWI76_RS21250 two-component system response regulator GlrR low > 92
Pantoea sp. MT58 0.45 IAI47_09810 guanine deaminase 0.55 IAI47_04945 two-component system response regulator GlrR low > 76
Enterobacter asburiae PDN3 0.45 EX28DRAFT_1948 guanine deaminase (EC 3.5.4.3) 0.55 EX28DRAFT_0096 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 76
Enterobacter sp. TBS_079 0.45 MPMX20_01658 Guanine deaminase 0.55 MPMX20_03423 Transcriptional regulatory protein QseF low > 85
Rahnella sp. WP5 0.43 EX31_RS07035 guanine deaminase 0.56 EX31_RS20615 two-component system response regulator GlrR low > 89
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS02225 guanine deaminase 0.35 HMPREF1078_RS14380 sigma-54 dependent transcriptional regulator low > 61
Alteromonas macleodii MIT1002 0.41 MIT1002_01570 Guanine deaminase 0.50 MIT1002_01326 Quorum-sensing regulator protein F low > 70

Not shown: 35 genomes with orthologs for HSERO_RS16335 only; 9 genomes with orthologs for HSERO_RS23710 only