Conservation of cofitness between HSERO_RS11505 and HSERO_RS19895 in Herbaspirillum seropedicae SmR1

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS11505 D-ribose pyranase 1.0 HSERO_RS19895 AraC family transcriptional regulator 0.30 8
Pseudomonas simiae WCS417 0.62 PS417_18380 ribose pyranase 0.50 PS417_01425 AraC family transcriptional regulator
Pseudomonas fluorescens SBW25 0.61 PFLU_RS20355 D-ribose pyranase 0.49 PFLU_RS18330 AraC family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS20355 D-ribose pyranase 0.49 PFLU_RS18330 AraC family transcriptional regulator
Pseudomonas putida KT2440 0.60 PP_2459 ribose pyranase 0.49 PP_2173 Transcriptional regulator, AraC family low > 96
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_00945 ribose pyranase 0.34 AO356_23800 AraC family transcriptional regulator
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_166 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) 0.48 Pf6N2E2_83 transcriptional regulator, AraC family
Pseudomonas sp. RS175 0.58 PFR28_02732 D-ribose pyranase 0.50 PFR28_02003 HTH-type transcriptional activator RhaR low > 88
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_20840 ribose pyranase 0.50 AO353_28535 AraC family transcriptional regulator low > 101
Rahnella sp. WP5 0.56 EX31_RS06170 D-ribose pyranase 0.54 EX31_RS13520 AraC family transcriptional regulator low > 89
Variovorax sp. SCN45 0.53 GFF2135 D-ribose pyranase (EC 5.4.99.62) 0.24 GFF3429 Transcriptional regulator, AraC family
Serratia liquefaciens MT49 0.52 IAI46_25075 D-ribose pyranase 0.16 IAI46_03005 MDR efflux pump AcrAB transcriptional activator RobA low > 86
Pectobacterium carotovorum WPP14 0.52 HER17_RS21550 D-ribose pyranase 0.48 HER17_RS19395 AraC family transcriptional regulator low > 75
Pantoea sp. MT58 0.51 IAI47_00350 D-ribose pyranase 0.14 IAI47_16240 MDR efflux pump AcrAB transcriptional activator RobA low > 76
Dickeya dianthicola ME23 0.49 DZA65_RS22315 D-ribose pyranase 0.15 DZA65_RS19505 MDR efflux pump AcrAB transcriptional activator RobA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF1709 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) 0.53 GFF3136 Uncharacterized protein ygiV low > 78
Azospirillum sp. SherDot2 0.47 MPMX19_03757 D-ribose pyranase 0.57 MPMX19_01363 HTH-type transcriptional activator RhaS low > 112
Bifidobacterium breve UCC2003 0.32 BBR_RS17755 D-ribose pyranase 0.14 BBR_RS14655 AraC family transcriptional regulator 0.52 20

Not shown: 24 genomes with orthologs for HSERO_RS11505 only; 26 genomes with orthologs for HSERO_RS19895 only