Conservation of cofitness between HSERO_RS03410 and HSERO_RS18300 in Herbaspirillum seropedicae SmR1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03410 polyisoprenoid-binding protein 1.0 HSERO_RS18300 LysR family transcriptional regulator 0.24 15
Paraburkholderia graminis OAS925 0.64 ABIE53_000826 polyisoprenoid-binding protein YceI 0.37 ABIE53_006314 DNA-binding transcriptional LysR family regulator low > 113
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS17440 polyisoprenoid-binding protein 0.55 RR42_RS21830 transcriptional regulator low > 128
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS05295 YceI family protein 0.30 LRK54_RS18015 LysR family transcriptional regulator low > 59
Rhodanobacter denitrificans MT42 0.54 LRK55_RS05075 YceI family protein 0.30 LRK55_RS17870 LysR family transcriptional regulator low > 63
Azospirillum sp. SherDot2 0.30 MPMX19_03035 Protein YceI 0.28 MPMX19_03900 Hca operon transcriptional activator HcaR low > 112
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_08035 hypothetical protein 0.49 AO353_23510 transcriptional regulator low > 101
Pseudomonas putida KT2440 0.22 PP_4981 polyisoprene-binding protein, acidic stress response factor 0.52 PP_3716 HTH-type transcriptional regulator low > 96
Escherichia coli ECRC98 0.22 JDDGAC_07420 yceI YceI family protein 0.30 JDDGAC_25260 hcaR DNA-binding transcriptional regulator HcaR low > 86
Escherichia coli ECOR27 0.22 NOLOHH_21290 yceI YceI family protein 0.30 NOLOHH_13255 hcaR DNA-binding transcriptional regulator HcaR low > 75
Escherichia coli ECRC100 0.22 OKFHMN_03760 yceI YceI family protein 0.30 OKFHMN_21585 hcaR DNA-binding transcriptional regulator HcaR — —
Escherichia coli ECRC99 0.22 KEDOAH_23995 yceI YceI family protein 0.30 KEDOAH_06635 hcaR DNA-binding transcriptional regulator HcaR — —
Escherichia coli BW25113 0.22 b1056 yceI hypothetical protein (NCBI) 0.30 b2537 hcaR DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism (NCBI) low > 76
Escherichia coli ECRC102 0.22 NIAGMN_24070 yceI YceI family protein 0.30 NIAGMN_19355 hcaR DNA-binding transcriptional regulator HcaR — —
Escherichia coli ECRC62 0.22 BNILDI_19450 yceI YceI family protein 0.30 BNILDI_12055 hcaR DNA-binding transcriptional regulator HcaR low > 75
Escherichia coli ECRC101 0.22 MCAODC_23120 yceI YceI family protein 0.30 MCAODC_12115 hcaR DNA-binding transcriptional regulator HcaR low > 87
Pseudomonas simiae WCS417 0.22 PS417_26530 hypothetical protein 0.53 PS417_23675 transcriptional regulator low > 88
Escherichia coli BL21 0.22 ECD_01052 periplasmic high pH-inducible lipid-binding protein 0.30 ECD_02429 hca operon transcriptional regulator — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS28185 YceI family protein 0.52 PFLU_RS25485 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS28185 YceI family protein 0.52 PFLU_RS25485 LysR family transcriptional regulator low > 109
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_02609 Protein YceI 0.30 OHPLBJKB_01172 Hca operon transcriptional activator HcaR low > 73
Escherichia coli ECOR38 0.21 HEPCGN_23730 yceI YceI family protein 0.30 HEPCGN_20725 hcaR DNA-binding transcriptional regulator HcaR low > 87
Pseudomonas sp. S08-1 0.20 OH686_10840 Protein yceI precursor 0.18 OH686_10530 Transcriptional regulator, LysR family low > 80
Shewanella sp. ANA-3 0.18 Shewana3_1179 hypothetical protein (RefSeq) 0.23 Shewana3_1278 LysR family transcriptional regulator (RefSeq) — —

Not shown: 48 genomes with orthologs for HSERO_RS03410 only; 3 genomes with orthologs for HSERO_RS18300 only