Conservation of cofitness between HSERO_RS20340 and HSERO_RS07390 in Herbaspirillum seropedicae SmR1

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS20340 DNA methylase N-4 1.0 HSERO_RS07390 tartrate dehydrogenase 0.44 11
Ralstonia solanacearum GMI1000 0.68 RS_RS09960 site-specific DNA-methyltransferase 0.76 RS_RS24845 tartrate dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.67 RPSI07_RS14735 site-specific DNA-methyltransferase 0.77 RPSI07_RS07555 tartrate dehydrogenase low > 81
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS14495 site-specific DNA-methyltransferase 0.77 ABZR87_RS21505 tartrate dehydrogenase low > 80
Ralstonia solanacearum UW163 0.66 UW163_RS11145 site-specific DNA-methyltransferase 0.78 UW163_RS16880 tartrate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS02580 site-specific DNA-methyltransferase 0.78 RALBFv3_RS16145 tartrate dehydrogenase low > 76
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS17650 site-specific DNA-methyltransferase 0.75 QEN71_RS32005 tartrate dehydrogenase low > 153
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS14355 DNA methylase N-4 0.71 RR42_RS02600 tartrate dehydrogenase low > 128
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS33870 DNA methylase N-4 0.74 BPHYT_RS30235 tartrate dehydrogenase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_06066 site-specific DNA-methyltransferase (adenine-specific) 0.74 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase low > 103
Paraburkholderia graminis OAS925 0.63 ABIE53_004810 site-specific DNA-methyltransferase (adenine-specific) 0.74 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase low > 113
Escherichia coli ECOR27 0.22 NOLOHH_09460 yhdJ adenine-specific DNA-methyltransferase 0.76 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 75
Escherichia coli BW25113 0.22 b3262 yhdJ putative methyltransferase (VIMSS) 0.76 b1800 yeaU predicted dehydrogenase (NCBI) low > 76
Escherichia coli ECOR38 0.22 HEPCGN_16495 yhdJ adenine-specific DNA-methyltransferase 0.75 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 87
Escherichia coli BL21 0.22 ECD_03120 DNA adenine methyltransferase, SAM-dependent 0.76 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase low > 61
Escherichia coli ECRC101 0.22 MCAODC_08195 yhdJ adenine-specific DNA-methyltransferase 0.76 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 87
Escherichia coli ECRC62 0.22 BNILDI_02060 yhdJ adenine-specific DNA-methyltransferase 0.76 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 75
Escherichia coli ECRC98 0.22 JDDGAC_21300 yhdJ adenine-specific DNA-methyltransferase 0.76 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 86
Escherichia coli ECRC99 0.22 KEDOAH_10475 yhdJ adenine-specific DNA-methyltransferase 0.76 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_00443 DNA adenine methyltransferase YhdJ 0.76 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] low > 73
Escherichia coli ECRC100 0.22 OKFHMN_17675 yhdJ adenine-specific DNA-methyltransferase 0.76 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 80
Escherichia coli ECRC102 0.22 NIAGMN_15435 yhdJ adenine-specific DNA-methyltransferase 0.76 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase — —

Not shown: 8 genomes with orthologs for HSERO_RS20340 only; 39 genomes with orthologs for HSERO_RS07390 only