Conservation of cofitness between HSERO_RS14740 and HSERO_RS06555 in Herbaspirillum seropedicae SmR1
14 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS14740 | | efflux transmembrane protein | 1.0 | HSERO_RS06555 | | benzoate 1,2-dioxygenase subunit beta | 0.36 | 10 |
Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS02210 | | MFS transporter | 0.55 | QEN71_RS10465 | | benzoate 1,2-dioxygenase small subunit | low | > 153 |
Paraburkholderia bryophila 376MFSha3.1 | 0.58 | H281DRAFT_04235 | | MFS transporter, DHA1 family, arabinose polymer transporter | 0.69 | H281DRAFT_01076 | | benzoate/toluate 1,2-dioxygenase beta subunit | — | — |
Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS16520 | | major facilitator superfamily protein | 0.63 | BPHYT_RS07860 | | benzoate 1,2-dioxygenase subunit beta | low | > 109 |
Variovorax sp. OAS795 | 0.56 | ABID97_RS15820 | | MFS transporter | 0.20 | ABID97_RS18640 | | aromatic-ring-hydroxylating dioxygenase subunit beta | — | — |
Variovorax sp. SCN45 | 0.56 | GFF1366 | | Uncharacterized MFS-type transporter | 0.17 | GFF3980 | | 3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-) | low | > 127 |
Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS33820 | | arabinose transporter permease | 0.58 | RR42_RS23495 | | benzene 1,2-dioxygenase | low | > 128 |
Klebsiella michiganensis M5al | 0.43 | BWI76_RS05420 | | MFS transporter | 0.62 | BWI76_RS13710 | | benzoate 1,2-dioxygenase small subunit | low | > 92 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.42 | GFF2876 | | Putative drug efflux protein | 0.22 | GFF5670 | | Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) | low | > 90 |
Pseudomonas putida KT2440 | 0.42 | PP_2535 | | putative inner membrane transport protein | 0.63 | PP_3162 | | benzoate 1,2-dioxygenase subunit beta | low | > 96 |
Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS00250 | | MFS transporter | 0.70 | ABZR87_RS12315 | | benzoate 1,2-dioxygenase small subunit | low | > 80 |
Ralstonia solanacearum UW163 | 0.40 | UW163_RS12400 | | MFS transporter | 0.57 | UW163_RS14120 | | benzoate 1,2-dioxygenase small subunit | — | — |
Acinetobacter radioresistens SK82 | 0.40 | MPMX26_03004 | | Inner membrane transport protein YdhP | 0.58 | MPMX26_01695 | | 2-halobenzoate 1,2-dioxygenase small subunit | — | — |
Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS14930 | | MFS transporter | 0.57 | RALBFv3_RS00785 | | benzoate 1,2-dioxygenase small subunit | low | > 76 |
Pseudomonas stutzeri RCH2 | 0.29 | Psest_1374 | | Arabinose efflux permease | 0.60 | Psest_2698 | | benzoate 1,2-dioxygenase, small subunit | low | > 67 |
Not shown: 41 genomes with orthologs for HSERO_RS14740 only; 8 genomes with orthologs for HSERO_RS06555 only