Conservation of cofitness between HSERO_RS23720 and HSERO_RS06245 in Herbaspirillum seropedicae SmR1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23720 histidine kinase 1.0 HSERO_RS06245 catalase-peroxidase 0.47 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF612 Putative sensor-like histidine kinase YfhK 0.63 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 90
Variovorax sp. SCN45 0.40 GFF7321 Sensor histidine kinase GlrK 0.73 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Acidovorax sp. GW101-3H11 0.36 Ac3H11_4009 Putative sensor-like histidine kinase YfhK 0.69 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 79
Dechlorosoma suillum PS 0.30 Dsui_2358 signal transduction histidine kinase 0.56 Dsui_2233 catalase/peroxidase HPI low > 51
Rahnella sp. WP5 0.22 EX31_RS20625 HAMP domain-containing histidine kinase 0.59 EX31_RS11140 catalase/peroxidase HPI low > 89
Serratia liquefaciens MT49 0.22 IAI46_19470 HAMP domain-containing histidine kinase 0.67 IAI46_17030 catalase/peroxidase HPI low > 86
Pantoea sp. MT58 0.21 IAI47_04935 HAMP domain-containing histidine kinase 0.58 IAI47_07215 catalase/peroxidase HPI low > 76
Erwinia tracheiphila SCR3 0.20 LU632_RS17940 HAMP domain-containing histidine kinase 0.60 LU632_RS19500 katG catalase/peroxidase HPI — —
Escherichia coli Nissle 1917 0.20 ECOLIN_RS14465 two component system sensor histidine kinase QseE/GlrK 0.60 ECOLIN_RS22765 catalase/peroxidase HPI low > 55
Escherichia coli BL21 0.20 ECD_02448 sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR 0.60 ECD_03828 catalase-peroxidase HPI, heme b-containing low > 61
Escherichia coli ECOR27 0.20 NOLOHH_13160 qseE two component system sensor histidine kinase QseE/GlrK 0.60 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Escherichia coli ECOR38 0.20 HEPCGN_20630 qseE two component system sensor histidine kinase QseE/GlrK 0.60 HEPCGN_12305 katG catalase/peroxidase HPI low > 87
Klebsiella michiganensis M5al 0.20 BWI76_RS21260 two-component sensor histidine kinase 0.60 BWI76_RS13925 catalase/peroxidase HPI low > 92
Escherichia fergusonii Becca 0.20 EFB2_01340 Sensor histidine kinase QseE 0.60 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli BW25113 0.20 b2556 yfhK putative 2-component sensor protein (VIMSS) 0.60 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia coli ECRC101 0.20 MCAODC_12015 qseE two component system sensor histidine kinase QseE/GlrK 0.60 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_01151 Sensor histidine kinase GlrK 0.60 OHPLBJKB_04108 Catalase-peroxidase low > 73
Escherichia coli ECRC98 0.20 JDDGAC_25150 qseE two component system sensor histidine kinase QseE/GlrK 0.60 JDDGAC_17285 katG catalase/peroxidase HPI low > 86
Escherichia coli ECRC100 0.20 OKFHMN_21485 qseE two component system sensor histidine kinase QseE/GlrK 0.60 OKFHMN_13660 katG catalase/peroxidase HPI low > 80
Escherichia coli ECRC62 0.20 BNILDI_11960 qseE two component system sensor histidine kinase QseE/GlrK 0.60 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC102 0.20 NIAGMN_19255 qseE two component system sensor histidine kinase QseE/GlrK 0.60 NIAGMN_11415 katG catalase/peroxidase HPI — —
Escherichia coli ECRC99 0.20 KEDOAH_06735 qseE two component system sensor histidine kinase QseE/GlrK 0.60 KEDOAH_14500 katG catalase/peroxidase HPI — —
Dickeya dadantii 3937 0.20 DDA3937_RS15650 HAMP domain-containing histidine kinase 0.70 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Enterobacter asburiae PDN3 0.19 EX28DRAFT_0094 Signal transduction histidine kinase 0.61 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF2457 Putative sensor-like histidine kinase YfhK 0.61 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Enterobacter sp. TBS_079 0.19 MPMX20_03425 Sensor histidine kinase QseE 0.61 MPMX20_04528 Catalase-peroxidase low > 85
Dickeya dianthicola 67-19 0.19 HGI48_RS15745 HAMP domain-containing histidine kinase 0.70 HGI48_RS08090 catalase/peroxidase HPI low > 71
Dickeya dianthicola ME23 0.19 DZA65_RS16825 HAMP domain-containing histidine kinase 0.70 DZA65_RS08685 catalase/peroxidase HPI low > 75
Pectobacterium carotovorum WPP14 0.18 HER17_RS05915 HAMP domain-containing histidine kinase 0.56 HER17_RS09165 catalase/peroxidase HPI low > 75
Alteromonas macleodii MIT1002 0.13 MIT1002_01324 Sensor histidine kinase QseE 0.52 MIT1002_03345 Catalase-peroxidase 2 precursor low > 70

Not shown: 1 genomes with orthologs for HSERO_RS23720 only; 44 genomes with orthologs for HSERO_RS06245 only