Conservation of cofitness between HER17_RS02445 and HER17_RS21105 in Pectobacterium carotovorum WPP14

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02445 YjjG family noncanonical pyrimidine nucleotidase 1.0 HER17_RS21105 formate dehydrogenase accessory sulfurtransferase FdhD 0.63 6
Shewanella loihica PV-4 0.25 Shew_0363 nucleotidase (RefSeq) 0.12 Shew_0053 formate dehydrogenase, subunit FdhD (RefSeq) low > 60
Escherichia coli ECRC99 0.25 KEDOAH_16860 yjjG pyrimidine 5'-nucleotidase 0.73 KEDOAH_14205 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli ECRC101 0.25 MCAODC_01800 yjjG pyrimidine 5'-nucleotidase 0.73 MCAODC_04450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 87
Escherichia coli ECRC100 0.25 OKFHMN_11285 yjjG pyrimidine 5'-nucleotidase 0.73 OKFHMN_13950 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 80
Escherichia coli BL21 0.25 ECD_04249 dUMP phosphatase 0.72 ECD_03780 formate dehydrogenase formation protein low > 61
Shewanella oneidensis MR-1 0.25 SO0372 HAD-superfamily hydrolase, subfamily IA, variant 1 protein family (NCBI ptt file) 0.43 SO0107 fdhD formate dehydrogenase accessory protein FdhD (NCBI ptt file) low > 76
Escherichia coli ECRC98 0.25 JDDGAC_14880 yjjG pyrimidine 5'-nucleotidase 0.72 JDDGAC_17575 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 86
Escherichia coli ECRC102 0.25 NIAGMN_09135 yjjG pyrimidine 5'-nucleotidase 0.73 NIAGMN_11705 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia fergusonii Becca 0.25 EFB2_04073 Pyrimidine 5'-nucleotidase YjjG 0.73 EFB2_04720 Sulfur carrier protein FdhD low > 86
Escherichia coli BW25113 0.25 b4374 yjjG nucleotidase (NCBI) 0.73 b3895 fdhD formate dehydrogenase accessory protein (NCBI) low > 76
Escherichia coli ECOR38 0.25 HEPCGN_09290 yjjG pyrimidine 5'-nucleotidase 0.73 HEPCGN_12585 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF1034 '5'-nucleotidase YjjG (EC 3.1.3.5)' transl_table=11 0.67 GFF2254 Formate dehydrogenase chain D (EC 1.2.1.2) low > 78
Shewanella sp. ANA-3 0.24 Shewana3_3797 nucleotidase (RefSeq) 0.43 Shewana3_0108 formate dehydrogenase accessory protein (RefSeq) low > 73
Enterobacter asburiae PDN3 0.23 EX28DRAFT_3582 noncanonical pyrimidine nucleotidase, YjjG family 0.72 EX28DRAFT_4379 formate dehydrogenase family accessory protein FdhD low > 76
Klebsiella michiganensis M5al 0.23 BWI76_RS04095 dUMP phosphatase 0.71 BWI76_RS00475 sulfurtransferase FdhD 0.27 9
Escherichia coli ECRC62 0.23 BNILDI_07995 yjjG pyrimidine 5'-nucleotidase 0.73 BNILDI_05455 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03688 'Pyrimidine 5'-nucleotidase YjjG' transl_table=11 0.73 OHPLBJKB_04155 Sulfur carrier protein FdhD low > 73
Escherichia coli Nissle 1917 0.23 ECOLIN_RS25105 pyrimidine 5'-nucleotidase 0.72 ECOLIN_RS22460 formate dehydrogenase accessory sulfurtransferase FdhD low > 55
Escherichia coli ECOR27 0.23 NOLOHH_03605 yjjG pyrimidine 5'-nucleotidase 0.73 NOLOHH_06070 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 75
Enterobacter sp. TBS_079 0.23 MPMX20_00672 Pyrimidine 5'-nucleotidase YjjG 0.72 MPMX20_04574 Sulfur carrier protein FdhD low > 85
Pantoea sp. MT58 0.22 IAI47_16360 pyrimidine 5'-nucleotidase 0.69 IAI47_18740 formate dehydrogenase accessory sulfurtransferase FdhD low > 76
Shewanella amazonensis SB2B 0.22 Sama_0285 nucleotidase (RefSeq) 0.11 Sama_3619 formate dehydrogenase accessory protein FdhD, putative (RefSeq) low > 62

Not shown: 12 genomes with orthologs for HER17_RS02445 only; 48 genomes with orthologs for HER17_RS21105 only