Conservation of cofitness between HER17_RS00665 and HER17_RS20775 in Pectobacterium carotovorum WPP14

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00665 envelope stress response regulator transcription factor CpxR 1.0 HER17_RS20775 ADP-heptose--LPS heptosyltransferase RfaF 0.78 15
Pantoea sp. MT58 0.92 IAI47_00760 envelope stress response regulator transcription factor CpxR 0.72 IAI47_00685 ADP-heptose--LPS heptosyltransferase RfaF — —
Erwinia tracheiphila SCR3 0.92 LU632_RS21855 cpxR envelope stress response regulator transcription factor CpxR 0.71 LU632_RS21920 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Rahnella sp. WP5 0.90 EX31_RS14320 envelope stress response regulator transcription factor CpxR 0.74 EX31_RS14400 ADP-heptose--LPS heptosyltransferase RfaF low > 89
Dickeya dadantii 3937 0.89 DDA3937_RS00780 envelope stress response regulator transcription factor CpxR 0.80 DDA3937_RS20445 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola 67-19 0.88 HGI48_RS20595 envelope stress response regulator transcription factor CpxR 0.79 HGI48_RS00765 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola ME23 0.88 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.79 DZA65_RS00820 ADP-heptose--LPS heptosyltransferase RfaF — —
Enterobacter sp. TBS_079 0.86 MPMX20_04556 Transcriptional regulatory protein CpxR 0.71 MPMX20_00113 ADP-heptose--LPS heptosyltransferase 2 — —
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.72 EX28DRAFT_3872 lipopolysaccharide heptosyltransferase II — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2280 Copper-sensing two-component system response regulator CpxR 0.72 GFF391 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) low > 78
Escherichia coli Nissle 1917 0.85 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR 0.72 ECOLIN_RS20650 ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli BW25113 0.85 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) 0.72 b3620 rfaF ADP-heptose:LPS heptosyltransferase II (NCBI) low > 76
Escherichia coli BL21 0.85 ECD_03798 response regulator in two-component regulatory system with CpxA 0.72 ECD_03477 ADP-heptose:LPS heptosyltransferase II — —
Escherichia coli ECOR27 0.85 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR 0.72 NOLOHH_07575 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 75
Escherichia coli ECOR38 0.85 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR 0.72 HEPCGN_14540 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 87
Escherichia coli ECRC62 0.85 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR 0.72 BNILDI_03935 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 75
Escherichia coli ECRC98 0.85 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR 0.72 JDDGAC_19320 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC102 0.85 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR 0.72 NIAGMN_13455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Klebsiella michiganensis M5al 0.85 BWI76_RS00720 DNA-binding response regulator 0.71 BWI76_RS27265 ADP-heptose--LPS heptosyltransferase II — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_04138 Transcriptional regulatory protein CpxR 0.72 OHPLBJKB_00080 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli ECRC100 0.85 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR 0.72 OKFHMN_15695 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 80
Escherichia coli ECRC99 0.85 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR 0.72 KEDOAH_12455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC101 0.85 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR 0.72 MCAODC_06205 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia fergusonii Becca 0.85 EFB2_04705 Transcriptional regulatory protein CpxR 0.72 EFB2_00191 ADP-heptose--LPS heptosyltransferase 2 — —
Serratia liquefaciens MT49 0.84 IAI46_24660 envelope stress response regulator transcription factor CpxR 0.77 IAI46_24740 ADP-heptose--LPS heptosyltransferase RfaF — —
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_13590 DNA-binding response regulator 0.48 CSW01_01245 lipopolysaccharide heptosyltransferase II 0.56 36
Pseudomonas stutzeri RCH2 0.40 Psest_1884 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.47 Psest_0451 lipopolysaccharide heptosyltransferase II — —
Pseudomonas sp. S08-1 0.39 OH686_20775 Two-component transcriptional response regulator, LuxR family 0.48 OH686_09690 lipopolysaccharide heptosyltransferase II — —
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_3547 DNA-binding response regulator 0.47 Pf1N1B4_1473 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4409 DNA-binding response regulator 0.47 PfGW456L13_212 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Pseudomonas sp. RS175 0.39 PFR28_03323 Transcriptional regulatory protein CpxR 0.46 PFR28_05063 ADP-heptose--LPS heptosyltransferase 2 — —

Not shown: 8 genomes with orthologs for HER17_RS00665 only; 24 genomes with orthologs for HER17_RS20775 only