Conservation of cofitness between HER17_RS00665 and HER17_RS20770 in Pectobacterium carotovorum WPP14

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00665 envelope stress response regulator transcription factor CpxR 1.0 HER17_RS20770 ADP-glyceromanno-heptose 6-epimerase 0.81 11
Pantoea sp. MT58 0.92 IAI47_00760 envelope stress response regulator transcription factor CpxR 0.85 IAI47_00690 ADP-glyceromanno-heptose 6-epimerase — —
Erwinia tracheiphila SCR3 0.92 LU632_RS21855 cpxR envelope stress response regulator transcription factor CpxR 0.87 LU632_RS21915 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Rahnella sp. WP5 0.90 EX31_RS14320 envelope stress response regulator transcription factor CpxR 0.91 EX31_RS14395 ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dadantii 3937 0.89 DDA3937_RS00780 envelope stress response regulator transcription factor CpxR 0.92 DDA3937_RS20440 ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dianthicola 67-19 0.88 HGI48_RS20595 envelope stress response regulator transcription factor CpxR 0.91 HGI48_RS00770 ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dianthicola ME23 0.88 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.91 DZA65_RS00825 ADP-glyceromanno-heptose 6-epimerase — —
Enterobacter sp. TBS_079 0.86 MPMX20_04556 Transcriptional regulatory protein CpxR 0.87 MPMX20_00114 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.87 EX28DRAFT_3871 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2280 Copper-sensing two-component system response regulator CpxR 0.86 GFF392 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) low > 78
Escherichia coli ECOR38 0.85 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR 0.87 HEPCGN_14545 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC98 0.85 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR 0.86 JDDGAC_19325 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli BL21 0.85 ECD_03798 response regulator in two-component regulatory system with CpxA 0.86 ECD_03476 ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_04138 Transcriptional regulatory protein CpxR 0.87 OHPLBJKB_00081 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia coli ECRC99 0.85 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR 0.86 KEDOAH_12450 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli Nissle 1917 0.85 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR 0.87 ECOLIN_RS20645 ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC62 0.85 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR 0.86 BNILDI_03930 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli BW25113 0.85 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) 0.86 b3619 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC100 0.85 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR 0.86 OKFHMN_15700 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC101 0.85 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR 0.86 MCAODC_06210 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC102 0.85 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR 0.86 NIAGMN_13460 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Klebsiella michiganensis M5al 0.85 BWI76_RS00720 DNA-binding response regulator 0.88 BWI76_RS27260 ADP-L-glycero-D-mannoheptose-6-epimerase — —
Escherichia coli ECOR27 0.85 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR 0.86 NOLOHH_07580 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia fergusonii Becca 0.85 EFB2_04705 Transcriptional regulatory protein CpxR 0.87 EFB2_00192 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Serratia liquefaciens MT49 0.84 IAI46_24660 envelope stress response regulator transcription factor CpxR 0.90 IAI46_24735 ADP-glyceromanno-heptose 6-epimerase — —
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_13590 DNA-binding response regulator 0.73 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase 0.57 23
Shewanella loihica PV-4 0.54 Shew_3570 two component transcriptional regulator (RefSeq) 0.62 Shew_3694 ADP-L-glycero-D-manno-heptose-6-epimerase (RefSeq) low > 60
Rhodospirillum rubrum S1H 0.34 Rru_A3422 Two component Transcriptional regulator, Winged helix family (NCBI) 0.36 Rru_A3278 ADP-L-glycero-D-manno-heptose-6-epimerase (NCBI) — —

Not shown: 11 genomes with orthologs for HER17_RS00665 only; 24 genomes with orthologs for HER17_RS20770 only