Conservation of cofitness between HER17_RS04205 and HER17_RS19040 in Pectobacterium carotovorum WPP14

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04205 6-carboxytetrahydropterin synthase QueD 1.0 HER17_RS19040 NupC/NupG family nucleoside CNT transporter 0.56 15
Escherichia coli BL21 0.89 ECD_02610 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) 0.46 ECD_02090 nucleoside permease low > 61
Escherichia coli ECRC102 0.89 NIAGMN_18135 queD 6-carboxytetrahydropterin synthase QueD 0.47 NIAGMN_21240 nupX Putative nucleoside permease NupX — —
Escherichia coli BW25113 0.89 b2765 ygcM 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) 0.47 b2161 yeiJ predicted nucleoside transporter (NCBI) low > 76
Escherichia fergusonii Becca 0.89 EFB2_01152 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.47 EFB2_01693 Putative pseudouridine transporter low > 86
Escherichia coli ECRC99 0.89 KEDOAH_07760 queD 6-carboxytetrahydropterin synthase QueD 0.47 KEDOAH_04710 nupX Putative nucleoside permease NupX — —
Escherichia coli ECOR27 0.89 NOLOHH_12180 queD 6-carboxytetrahydropterin synthase QueD 0.47 NOLOHH_15050 nupX Putative nucleoside permease NupX low > 75
Klebsiella michiganensis M5al 0.89 BWI76_RS22775 6-carboxytetrahydropterin synthase QueD 0.77 BWI76_RS04125 NupC/NupG family nucleoside CNT transporter 0.15 27
Escherichia coli ECRC100 0.89 OKFHMN_20365 queD 6-carboxytetrahydropterin synthase QueD 0.47 OKFHMN_23475 nupX Putative nucleoside permease NupX low > 80
Escherichia coli ECRC98 0.89 JDDGAC_24030 queD 6-carboxytetrahydropterin synthase QueD 0.47 JDDGAC_27435 nupX Putative nucleoside permease NupX low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_00968 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.47 OHPLBJKB_01550 Putative nucleoside permease NupX low > 73
Escherichia coli Nissle 1917 0.89 ECOLIN_RS15415 6-carboxytetrahydropterin synthase QueD 0.47 ECOLIN_RS12660 NupC/NupG family nucleoside CNT transporter low > 55
Escherichia coli ECRC62 0.89 BNILDI_10730 queD 6-carboxytetrahydropterin synthase QueD 0.47 BNILDI_13970 nupX Putative nucleoside permease NupX low > 75
Escherichia coli ECRC101 0.89 MCAODC_10890 queD 6-carboxytetrahydropterin synthase QueD 0.47 MCAODC_14525 nupX Putative nucleoside permease NupX low > 87
Escherichia coli ECOR38 0.88 HEPCGN_19100 queD 6-carboxytetrahydropterin synthase QueD 0.47 HEPCGN_22740 nupX Putative nucleoside permease NupX low > 87
Serratia liquefaciens MT49 0.88 IAI46_03680 6-carboxytetrahydropterin synthase QueD 0.81 IAI46_02905 NupC/NupG family nucleoside CNT transporter low > 86
Vibrio cholerae E7946 ATCC 55056 0.81 CSW01_06560 6-carboxytetrahydropterin synthase QueD 0.67 CSW01_11920 NupC/NupG family nucleoside CNT transporter low > 62
Lysobacter sp. OAE881 0.71 ABIE51_RS17950 6-carboxytetrahydropterin synthase QueD 0.36 ABIE51_RS16430 nucleoside transporter C-terminal domain-containing protein 0.36 14
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.4528.1 hypothetical protein 0.39 Xcc-8004.4301.1 Nucleoside permease NupC low > 74
Rhodopseudomonas palustris CGA009 0.53 TX73_008525 6-carboxytetrahydropterin synthase QueD 0.28 TX73_011185 nucleoside transporter C-terminal domain-containing protein low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS08690 6-carboxytetrahydropterin synthase 0.30 A4249_RS09815 nucleoside transporter C-terminal domain-containing protein — —
Caulobacter crescentus NA1000 0.31 CCNA_03260 queuosine biosynthesis protein QueD 0.27 CCNA_02171 nucleoside permease nupC low > 66
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_03260 queuosine biosynthesis protein QueD 0.27 CCNA_02171 nucleoside permease nupC low > 67
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS00755 6-carboxytetrahydropterin synthase QueD 0.32 HMPREF1078_RS10140 nucleoside transporter C-terminal domain-containing protein — —

Not shown: 37 genomes with orthologs for HER17_RS04205 only; 11 genomes with orthologs for HER17_RS19040 only