Conservation of cofitness between HER17_RS02000 and HER17_RS10805 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02000 two-component system response regulator PmrA 1.0 HER17_RS10805 L-arabinose ABC transporter ATP-binding protein AraG 0.62 11
Dickeya dianthicola ME23 0.88 DZA65_RS20570 two-component system response regulator PmrA 0.85 DZA65_RS11080 L-arabinose ABC transporter ATP-binding protein AraG low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS19450 two-component system response regulator PmrA 0.85 HGI48_RS10600 L-arabinose ABC transporter ATP-binding protein AraG low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS19350 two-component system response regulator PmrA 0.85 DDA3937_RS10600 L-arabinose ABC transporter ATP-binding protein AraG low > 74
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3235 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.77 EX28DRAFT_0653 ABC-type sugar transport system, ATPase component low > 76
Rahnella sp. WP5 0.67 EX31_RS08605 two-component system response regulator PmrA 0.83 EX31_RS06650 L-arabinose ABC transporter ATP-binding protein AraG low > 89
Enterobacter sp. TBS_079 0.64 MPMX20_04087 Transcriptional regulatory protein BasR 0.77 MPMX20_02807 Arabinose import ATP-binding protein AraG low > 85
Escherichia fergusonii Becca 0.64 EFB2_04469 Transcriptional regulatory protein BasR 0.78 EFB2_02046 Arabinose import ATP-binding protein AraG low > 86
Escherichia coli Nissle 1917 0.64 ECOLIN_RS23805 two-component system response regulator BasR 0.78 ECOLIN_RS10825 arabinose ABC transporter ATP-binding protein AraG low > 55
Escherichia coli ECRC100 0.64 OKFHMN_12570 basR two-component system response regulator BasR 0.78 OKFHMN_26075 araG arabinose ABC transporter ATP-binding protein AraG low > 80
Escherichia coli BW25113 0.64 b4113 basR DNA-binding response regulator in two-component regulatory system with BasS (NCBI) 0.78 b1900 araG fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components (NCBI) low > 76
Escherichia coli ECOR38 0.64 HEPCGN_11205 basR two-component system response regulator BasR 0.78 HEPCGN_04495 araG arabinose ABC transporter ATP-binding protein AraG low > 87
Escherichia coli ECOR27 0.63 NOLOHH_04835 basR two-component system response regulator BasR 0.78 NOLOHH_16515 araG arabinose ABC transporter ATP-binding protein AraG low > 75
Escherichia coli ECRC102 0.63 NIAGMN_10415 basR two-component system response regulator BasR 0.78 NIAGMN_01990 araG arabinose ABC transporter ATP-binding protein AraG — —
Escherichia coli BL21 0.63 ECD_03984 response regulator in two-component regulatory system with BasS 0.78 ECD_01868 L-arabinose ABC transporter ATPase low > 61
Escherichia coli ECRC101 0.63 MCAODC_03080 basR two-component system response regulator BasR 0.78 MCAODC_19330 araG arabinose ABC transporter ATP-binding protein AraG low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_03931 Transcriptional regulatory protein BasR 0.78 OHPLBJKB_01829 Arabinose import ATP-binding protein AraG low > 73
Escherichia coli ECRC99 0.63 KEDOAH_15595 basR two-component system response regulator BasR 0.78 KEDOAH_02030 araG arabinose ABC transporter ATP-binding protein AraG — —
Escherichia coli ECRC98 0.63 JDDGAC_16205 basR two-component system response regulator BasR 0.78 JDDGAC_00650 araG arabinose ABC transporter ATP-binding protein AraG low > 86
Escherichia coli ECRC62 0.63 BNILDI_06655 basR two-component system response regulator BasR 0.78 BNILDI_15305 araG arabinose ABC transporter ATP-binding protein AraG low > 75
Klebsiella michiganensis M5al 0.62 BWI76_RS08795 DNA-binding response regulator 0.79 BWI76_RS18245 L-arabinose transporter ATP-binding protein low > 92
Pantoea sp. MT58 0.57 IAI47_08260 two-component system response regulator PmrA 0.78 IAI47_10385 L-arabinose ABC transporter ATP-binding protein AraG low > 76
Serratia liquefaciens MT49 0.57 IAI46_01870 two-component system response regulator PmrA 0.82 IAI46_11515 L-arabinose ABC transporter ATP-binding protein AraG low > 86
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS13215 transcriptional regulator 0.40 RR42_RS32900 sugar ABC transporter ATPase low > 128
Rhizobium sp. OAE497 0.41 ABIE40_RS23395 response regulator 0.47 ABIE40_RS17080 L-arabinose ABC transporter ATP-binding protein AraG low > 107
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS07960 response regulator transcription factor 0.54 ABZR87_RS01475 L-arabinose ABC transporter ATP-binding protein AraG low > 80
Ralstonia solanacearum GMI1000 0.36 RS_RS02755 DNA-binding response regulator 0.52 RS_RS13795 arabinose import ATP-binding protein AraG low > 80

Not shown: 23 genomes with orthologs for HER17_RS02000 only; 18 genomes with orthologs for HER17_RS10805 only