Conservation of cofitness between HER17_RS09975 and HER17_RS09980 in Pectobacterium carotovorum WPP14

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS09975 type III secretion system export apparatus subunit SctS 1.0 HER17_RS09980 type III secretion system export apparatus subunit SctR 0.52 15
Erwinia tracheiphila SCR3 0.80 LU632_RS03140 sctS type III secretion system export apparatus subunit SctS 0.79 LU632_RS03145 sctR type III secretion system export apparatus subunit SctR 0.66 6
Dickeya dadantii 3937 0.72 DDA3937_RS11700 type III secretion system export apparatus subunit SctS 0.83 DDA3937_RS11695 type III secretion system export apparatus subunit SctR low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS11760 type III secretion system export apparatus subunit SctS 0.82 HGI48_RS11755 type III secretion system export apparatus subunit SctR — —
Dickeya dianthicola ME23 0.71 DZA65_RS12245 type III secretion system export apparatus subunit SctS 0.82 DZA65_RS12240 type III secretion system export apparatus protein SctR low > 75
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4537 Type III secretion inner membrane protein (YscS,homologous to flagellar export components) 0.70 Pf6N2E2_4536 Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components) low > 103
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS03555 EscS/YscS/HrcS family type III secretion system export apparatus protein 0.68 PFLU_RS03550 EscR/YscR/HrcR family type III secretion system export apparatus protein low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS03555 EscS/YscS/HrcS family type III secretion system export apparatus protein 0.68 PFLU_RS03550 EscR/YscR/HrcR family type III secretion system export apparatus protein low > 109
Pseudomonas simiae WCS417 0.66 PS417_03495 type III secretory protein EscS 0.68 PS417_03490 type III secretion system protein SsaR low > 88
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_1207 type III secretion protein HrcS 0.68 Psyr_1208 type III secretion protein HrcR — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_1207 type III secretion protein HrcS 0.68 Psyr_1208 type III secretion protein HrcR 0.55 71
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS03980 type III secretion HrcS protein 0.48 HSERO_RS03975 flagellar biosynthesis protein FliP low > 78
Desulfovibrio vulgaris Miyazaki F 0.45 DvMF_2414 type III secretion protein, HrpO family (RefSeq) 0.42 DvMF_2439 type III secretion system protein (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVUA0103 invX type III secretion protein, HrpO family (TIGR) 0.40 DVUA0122 yscR type III secretion system protein, YscR family (TIGR) low > 55
Escherichia coli ECRC99 0.39 KEDOAH_12850 escS type III secretion system LEE export apparatus protein EscS 0.40 KEDOAH_12855 escR Type III secretion systemminor export apparatus protein EscR — —
Escherichia coli ECRC100 0.39 OKFHMN_15295 escS type III secretion system LEE export apparatus protein EscS 0.40 OKFHMN_15290 escR Type III secretion systemminor export apparatus protein EscR — —
Escherichia coli ECRC102 0.39 NIAGMN_13055 escS type III secretion system LEE export apparatus protein EscS 0.40 NIAGMN_13050 escR Type III secretion systemminor export apparatus protein EscR — —
Escherichia coli ECRC98 0.39 JDDGAC_18920 escS type III secretion system LEE export apparatus protein EscS 0.40 JDDGAC_18915 escR Type III secretion systemminor export apparatus protein EscR low > 86
Escherichia coli ECRC101 0.39 MCAODC_05805 escS type III secretion system LEE export apparatus protein EscS 0.40 MCAODC_05800 escR Type III secretion systemminor export apparatus protein EscR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00857 hypothetical protein 0.34 OHPLBJKB_00856 Surface presentation of antigens protein SpaP low > 73
Paraburkholderia graminis OAS925 0.33 ABIE53_006036 type III secretion protein S 0.38 ABIE53_006037 type III secretion protein R low > 113
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS18125 flagellar biosynthetic protein FliQ 0.33 ABZR87_RS18140 type III secretion system export apparatus subunit SctR — —

Not shown: 2 genomes with orthologs for HER17_RS09975 only; 9 genomes with orthologs for HER17_RS09980 only