Conservation of cofitness between HER17_RS09565 and HER17_RS09145 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS09565 YcjF family protein 1.0 HER17_RS09145 multidrug efflux SMR transporter 0.51 9
Escherichia coli ECRC98 0.75 JDDGAC_04855 ycjF UPF0283 membrane protein YcjF 0.58 JDDGAC_16010 sugE quaternary ammonium compound efflux SMR transporter SugE low > 86
Escherichia coli ECRC99 0.75 KEDOAH_26465 ycjF UPF0283 membrane protein YcjF 0.58 KEDOAH_15790 sugE quaternary ammonium compound efflux SMR transporter SugE — —
Escherichia coli ECOR38 0.75 HEPCGN_25880 ycjF UPF0283 membrane protein YcjF 0.58 HEPCGN_10600 sugE quaternary ammonium compound efflux SMR transporter SugE low > 87
Escherichia coli ECRC102 0.75 NIAGMN_26480 ycjF UPF0283 membrane protein YcjF 0.58 NIAGMN_10220 sugE quaternary ammonium compound efflux SMR transporter SugE — —
Escherichia coli ECRC101 0.75 MCAODC_15960 ycjF UPF0283 membrane protein YcjF 0.58 MCAODC_02885 sugE quaternary ammonium compound efflux SMR transporter SugE low > 87
Escherichia coli ECRC100 0.75 OKFHMN_02310 ycjF UPF0283 membrane protein YcjF 0.58 OKFHMN_12375 sugE quaternary ammonium compound efflux SMR transporter SugE — —
Escherichia coli ECRC62 0.74 BNILDI_18155 ycjF UPF0283 membrane protein YcjF 0.58 BNILDI_06855 sugE quaternary ammonium compound efflux SMR transporter SugE low > 75
Escherichia coli BW25113 0.74 b1322 ycjF hypothetical protein (NCBI) 0.58 b4148 sugE suppresses groEL, may be chaperone (VIMSS) low > 76
Escherichia coli BL21 0.74 ECD_01299 UPF0283 family inner membrane protein 0.58 ECD_04020 multidrug efflux system protein — —
Escherichia fergusonii Becca 0.74 EFB2_02605 hypothetical protein 0.58 EFB2_04385 Guanidinium exporter low > 86
Escherichia coli ECOR27 0.74 NOLOHH_20005 ycjF UPF0283 membrane protein YcjF 0.58 NOLOHH_04635 sugE quaternary ammonium compound efflux SMR transporter SugE low > 75
Escherichia coli Nissle 1917 0.74 ECOLIN_RS07940 YcjF family protein 0.58 ECOLIN_RS24100 quaternary ammonium compound efflux SMR transporter SugE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_02360 hypothetical protein 0.58 OHPLBJKB_03892 Quaternary ammonium compound-resistance protein SugE low > 73
Serratia liquefaciens MT49 0.74 IAI46_13475 TIGR01620 family protein 0.55 IAI46_01525 quaternary ammonium compound efflux SMR transporter SugE low > 86
Rahnella sp. WP5 0.70 EX31_RS15660 TIGR01620 family protein 0.58 EX31_RS00585 multidrug efflux SMR transporter low > 89
Enterobacter asburiae PDN3 0.70 EX28DRAFT_0993 TIGR01620 family protein 0.55 EX28DRAFT_3348 Membrane transporters of cations and cationic drugs low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF2680 Membrane protein YcjF 0.56 GFF2001 Quaternary ammonium compound-resistance protein SugE low > 78
Klebsiella michiganensis M5al 0.67 BWI76_RS12480 TIGR01620 family protein 0.55 BWI76_RS02430 multidrug transporter low > 92
Enterobacter sp. TBS_079 0.67 MPMX20_02455 hypothetical protein 0.56 MPMX20_00430 Guanidinium exporter low > 85
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_06600 TIGR01620 family protein 0.44 CSW01_06990 QacE family quaternary ammonium compound efflux SMR transporter low > 62
Shewanella oneidensis MR-1 0.22 SO1811 conserved hypothetical protein (NCBI ptt file) 0.44 SO1901 sugE sugE protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.21 Shewana3_2644 hypothetical protein (RefSeq) 0.45 Shewana3_1676 small multidrug resistance protein (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.14 TX73_008130 TIGR01620 family protein 0.53 TX73_003750 multidrug efflux SMR transporter low > 86
Bosea sp. OAE506 0.12 ABIE41_RS13235 TIGR01620 family protein 0.53 ABIE41_RS19675 quaternary ammonium compound efflux SMR transporter SugE low > 77

Not shown: 8 genomes with orthologs for HER17_RS09565 only; 42 genomes with orthologs for HER17_RS09145 only