Conservation of cofitness between HER17_RS11420 and HER17_RS08960 in Pectobacterium carotovorum WPP14

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11420 sugar ABC transporter permease 1.0 HER17_RS08960 pyruvate kinase PykF 0.66 5
Dickeya dadantii 3937 0.97 DDA3937_RS11345 sugar ABC transporter permease 0.91 DDA3937_RS12740 pyruvate kinase PykF low > 74
Dickeya dianthicola ME23 0.97 DZA65_RS11730 sugar ABC transporter permease 0.90 DZA65_RS13270 pyruvate kinase PykF low > 75
Dickeya dianthicola 67-19 0.97 HGI48_RS11385 sugar ABC transporter permease 0.90 HGI48_RS12805 pyruvate kinase PykF 0.53 50
Klebsiella michiganensis M5al 0.91 BWI76_RS23380 sugar ABC transporter permease 0.84 BWI76_RS16960 pyruvate kinase — —
Enterobacter sp. TBS_079 0.91 MPMX20_03710 Lactose transport system permease protein LacF 0.85 MPMX20_01951 Pyruvate kinase I low > 85
Bifidobacterium breve UCC2003 0.36 BBR_RS19230 sugar ABC transporter permease 0.33 BBR_RS14295 pyruvate kinase — —
Mycobacterium tuberculosis H37Rv 0.30 Rv2040c Probable sugar-transport integral membrane protein ABC transporter 0.36 Rv1617 Probable pyruvate kinase PykA — —
Azospirillum sp. SherDot2 0.26 MPMX19_03301 Melibiose/raffinose/stachyose import permease protein MelD 0.33 MPMX19_04074 Pyruvate kinase low > 112
Variovorax sp. OAS795 0.23 ABID97_RS29290 sugar ABC transporter permease 0.31 ABID97_RS27675 pyruvate kinase low > 91
Serratia liquefaciens MT49 0.21 IAI46_12945 sugar ABC transporter permease 0.87 IAI46_11185 pyruvate kinase PykF low > 86
Pantoea sp. MT58 0.21 IAI47_20095 sugar ABC transporter permease 0.87 IAI47_10840 pyruvate kinase PykF low > 76
Azospirillum brasilense Sp245 0.21 AZOBR_RS18175 sugar ABC transporter 0.31 AZOBR_RS06845 pyruvate kinase low > 97
Erwinia tracheiphila SCR3 0.20 LU632_RS00815 sugar ABC transporter permease 0.85 LU632_RS11145 pykF pyruvate kinase PykF low > 74
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS22880 ABC transporter permease 0.33 RR42_RS33735 pyruvate kinase low > 128
Escherichia coli BL21 0.17 ECD_01288 putative sugar ABC transporter permease 0.85 ECD_01645 pyruvate kinase I low > 61
Escherichia fergusonii Becca 0.17 EFB2_02616 Inner membrane ABC transporter permease protein YcjO 0.84 EFB2_02316 Pyruvate kinase I low > 86
Enterobacter asburiae PDN3 0.17 EX28DRAFT_0982 ABC-type sugar transport systems, permease components 0.85 EX28DRAFT_1679 pyruvate kinase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_02371 Inner membrane ABC transporter permease protein YcjO 0.85 OHPLBJKB_02048 Pyruvate kinase I low > 73
Escherichia coli BW25113 0.17 b1311 ycjO predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) 0.85 b1676 pykF pyruvate kinase (NCBI) low > 76
Escherichia coli ECRC62 0.17 BNILDI_18210 ugpA sugar ABC transporter permease 0.85 BNILDI_16600 pykF pyruvate kinase PykF low > 75
Escherichia coli ECRC102 0.17 NIAGMN_26535 ugpA sugar ABC transporter permease 0.85 NIAGMN_00775 pykF pyruvate kinase PykF — —
Escherichia coli ECRC99 0.17 KEDOAH_26410 ugpA sugar ABC transporter permease 0.85 KEDOAH_00820 pykF pyruvate kinase PykF — —
Escherichia coli ECOR27 0.17 NOLOHH_20060 ugpA sugar ABC transporter permease 0.85 NOLOHH_17810 pykF pyruvate kinase PykF low > 75
Escherichia coli ECRC98 0.17 JDDGAC_04910 ugpA sugar ABC transporter permease 0.85 JDDGAC_01865 pykF pyruvate kinase PykF — —
Escherichia coli ECRC101 0.17 MCAODC_15905 ugpA sugar ABC transporter permease 0.85 MCAODC_18120 pykF pyruvate kinase PykF — —
Escherichia coli ECRC100 0.17 OKFHMN_02365 ugpA sugar ABC transporter permease 0.85 OKFHMN_27290 pykF pyruvate kinase PykF — —
Escherichia coli Nissle 1917 0.17 ECOLIN_RS07885 sugar ABC transporter permease 0.85 ECOLIN_RS09375 pyruvate kinase PykF low > 55
Escherichia coli ECOR38 0.17 HEPCGN_25825 ugpA sugar ABC transporter permease 0.85 HEPCGN_05675 pykF pyruvate kinase PykF — —

Not shown: 18 genomes with orthologs for HER17_RS11420 only; 31 genomes with orthologs for HER17_RS08960 only