Conservation of cofitness between HER17_RS12895 and HER17_RS08555 in Pectobacterium carotovorum WPP14

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12895 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 1.0 HER17_RS08555 glucans biosynthesis glucosyltransferase MdoH 0.75 14
Serratia liquefaciens MT49 0.80 IAI46_17305 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 IAI46_09610 glucans biosynthesis glucosyltransferase MdoH low > 86
Erwinia tracheiphila SCR3 0.75 LU632_RS17465 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 LU632_RS10275 mdoH glucans biosynthesis glucosyltransferase MdoH low > 74
Rahnella sp. WP5 0.74 EX31_RS19120 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.73 EX31_RS24255 glucans biosynthesis glucosyltransferase MdoH low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF3761 Lipoprotein spr precursor 0.73 GFF3329 Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-) low > 78
Dickeya dadantii 3937 0.72 DDA3937_RS09195 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.81 DDA3937_RS13215 glucans biosynthesis glucosyltransferase MdoH low > 74
Enterobacter sp. TBS_079 0.72 MPMX20_03141 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.73 MPMX20_01730 Glucans biosynthesis glucosyltransferase H 0.43 48
Dickeya dianthicola ME23 0.72 DZA65_RS09540 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.80 DZA65_RS13750 glucans biosynthesis glucosyltransferase MdoH low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS09235 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.80 HGI48_RS13275 glucans biosynthesis glucosyltransferase MdoH 0.59 71
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0386 Cell wall-associated hydrolases (invasion-associated proteins) 0.73 EX28DRAFT_1881 Membrane glycosyltransferase low > 76
Escherichia coli ECOR27 0.71 NOLOHH_14975 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 NOLOHH_21325 mdoH glucans biosynthesis glucosyltransferase MdoH low > 75
Escherichia coli ECRC100 0.71 OKFHMN_23400 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 OKFHMN_03795 mdoH glucans biosynthesis glucosyltransferase MdoH low > 80
Escherichia coli ECOR38 0.71 HEPCGN_22665 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 HEPCGN_23695 mdoH glucans biosynthesis glucosyltransferase MdoH low > 87
Escherichia coli ECRC98 0.71 JDDGAC_27360 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 JDDGAC_07455 mdoH glucans biosynthesis glucosyltransferase MdoH 0.61 84
Escherichia coli Nissle 1917 0.71 ECOLIN_RS12720 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 ECOLIN_RS06095 glucans biosynthesis glucosyltransferase MdoH low > 55
Escherichia fergusonii Becca 0.71 EFB2_01681 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.72 EFB2_02924 Glucans biosynthesis glucosyltransferase H low > 86
Escherichia coli BW25113 0.71 b2175 spr predicted peptidase, outer membrane lipoprotein (NCBI) 0.72 b1049 mdoH glucosyltransferase MdoH (NCBI) 0.26 60
Escherichia coli ECRC101 0.71 MCAODC_14450 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 MCAODC_23155 mdoH glucans biosynthesis glucosyltransferase MdoH low > 87
Escherichia coli ECRC99 0.71 KEDOAH_04785 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 KEDOAH_23960 mdoH glucans biosynthesis glucosyltransferase MdoH — —
Escherichia coli ECRC62 0.71 BNILDI_13895 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 BNILDI_19485 mdoH glucans biosynthesis glucosyltransferase MdoH low > 75
Escherichia coli BL21 0.71 ECD_02105 murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase 0.72 ECD_01046 OPG biosynthetic ACP-dependent transmembrane UDP-glucose beta-1,2 glycosyltransferase; nutrient-dependent cell size regulator, FtsZ assembly antagonist low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01534 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.72 OHPLBJKB_02615 Glucans biosynthesis glucosyltransferase H low > 73
Escherichia coli ECRC102 0.71 NIAGMN_21165 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 NIAGMN_24035 mdoH glucans biosynthesis glucosyltransferase MdoH — —
Klebsiella michiganensis M5al 0.71 BWI76_RS19770 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 BWI76_RS10935 glucan biosynthesis glucosyltransferase H 0.46 53
Pantoea sp. MT58 0.67 IAI47_06625 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.72 IAI47_12275 glucans biosynthesis glucosyltransferase MdoH low > 76
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_02660 peptidase P60 0.61 AO353_12315 glucosyltransferase MdoH 0.36 62
Pseudomonas sp. RS175 0.26 PFR28_03213 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.63 PFR28_04979 Glucans biosynthesis glucosyltransferase H low > 88
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_19115 peptidase P60 0.63 AO356_09560 glucosyltransferase MdoH 0.51 21
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_3684 NLP/P60 0.61 Psyr_0378 Glycosyl transferase, family 2 — —
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_3684 NLP/P60 0.61 Psyr_0378 Glycosyl transferase, family 2 0.36 67

Not shown: 5 genomes with orthologs for HER17_RS12895 only; 15 genomes with orthologs for HER17_RS08555 only