Conservation of cofitness between HER17_RS20780 and HER17_RS03455 in Pectobacterium carotovorum WPP14

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20780 lipopolysaccharide heptosyltransferase RfaC 1.0 HER17_RS03455 D-threonate 4-phosphate dehydrogenase 0.92 4
Dickeya dianthicola ME23 0.78 DZA65_RS00815 lipopolysaccharide heptosyltransferase RfaC 0.91 DZA65_RS18920 D-threonate 4-phosphate dehydrogenase — —
Dickeya dadantii 3937 0.77 DDA3937_RS20450 lipopolysaccharide heptosyltransferase RfaC 0.92 DDA3937_RS17835 D-threonate 4-phosphate dehydrogenase — —
Dickeya dianthicola 67-19 0.77 HGI48_RS00760 lipopolysaccharide heptosyltransferase RfaC 0.91 HGI48_RS17775 D-threonate 4-phosphate dehydrogenase — —
Pantoea sp. MT58 0.73 IAI47_00680 lipopolysaccharide heptosyltransferase RfaC 0.84 IAI47_15730 D-threonate 4-phosphate dehydrogenase — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS20655 lipopolysaccharide heptosyltransferase RfaC 0.80 ECOLIN_RS03665 D-threonate 4-phosphate dehydrogenase — —
Escherichia fergusonii Becca 0.72 EFB2_00190 Lipopolysaccharide heptosyltransferase 1 0.80 EFB2_03416 D-threonate 4-phosphate dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF390 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.80 GFF110 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) low > 78
Erwinia tracheiphila SCR3 0.70 LU632_RS21925 rfaC lipopolysaccharide heptosyltransferase RfaC 0.83 LU632_RS04955 D-threonate 4-phosphate dehydrogenase — —
Klebsiella michiganensis M5al 0.68 BWI76_RS27270 ADP-heptose--LPS heptosyl transferase I 0.81 BWI76_RS15230 4-hydroxythreonine-4-phosphate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_020670 lipopolysaccharide heptosyltransferase I 0.32 TX73_015855 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Castellaniella sp019104865 MT123 0.36 ABCV34_RS13305 lipopolysaccharide heptosyltransferase I 0.39 ABCV34_RS02270 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Paraburkholderia graminis OAS925 0.30 ABIE53_001190 heptosyltransferase-1 0.42 ABIE53_003878 4-hydroxythreonine-4-phosphate dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_00079 heptosyltransferase-1 0.41 H281DRAFT_00649 4-hydroxythreonine-4-phosphate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS08750 lipopolysaccharide heptosyltransferase I 0.39 ABZR87_RS05840 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 80
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS25410 lipopolysaccharide heptosyltransferase I 0.42 QEN71_RS06570 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.11 ABZR88_RS13940 glycosyltransferase family 9 protein 0.40 ABZR88_RS01845 4-hydroxythreonine-4-phosphate dehydrogenase PdxA low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.10 CA264_20500 glycosyl transferase 0.27 CA264_03840 4-hydroxythreonine-4-phosphate dehydrogenase PdxA — —

Not shown: 38 genomes with orthologs for HER17_RS20780 only; 21 genomes with orthologs for HER17_RS03455 only