Conservation of cofitness between HER17_RS19710 and HER17_RS03345 in Pectobacterium carotovorum WPP14

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS19710 alcohol dehydrogenase 1.0 HER17_RS03345 metalloregulator ArsR/SmtB family transcription factor 0.49 19
Serratia liquefaciens MT49 0.81 IAI46_21750 alcohol dehydrogenase 0.41 IAI46_09640 winged helix-turn-helix transcriptional regulator low > 86
Dickeya dadantii 3937 0.81 DDA3937_RS01800 alcohol dehydrogenase 0.37 DDA3937_RS20270 helix-turn-helix transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS01695 alcohol dehydrogenase 0.38 HGI48_RS00955 helix-turn-helix transcriptional regulator low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS01770 alcohol dehydrogenase 0.38 DZA65_RS01015 helix-turn-helix transcriptional regulator low > 75
Enterobacter sp. TBS_079 0.76 MPMX20_03855 Alcohol dehydrogenase YqhD 0.44 MPMX20_03547 putative HTH-type transcriptional regulator YgaV low > 85
Escherichia coli BW25113 0.76 b3011 yqhD alcohol dehydrogenase, NAD(P)-dependent (NCBI) 0.43 b2667 ygaV predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECOR38 0.76 HEPCGN_17810 yqhD alcohol dehydrogenase 0.43 HEPCGN_20180 ygaV putative HTH-type transcriptional regulator YgaV low > 87
Escherichia coli ECRC62 0.76 BNILDI_00795 yqhD alcohol dehydrogenase 0.43 BNILDI_11270 ygaV putative HTH-type transcriptional regulator YgaV low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_00690 Alcohol dehydrogenase YqhD 0.43 OHPLBJKB_01065 putative HTH-type transcriptional regulator YgaV low > 73
Escherichia coli BL21 0.76 ECD_02884 aldehyde reductase, NADPH-dependent 0.43 ECD_02523 tributyltin-inducible repressor of ygaVP low > 61
Escherichia fergusonii Becca 0.76 EFB2_00799 Alcohol dehydrogenase YqhD 0.42 EFB2_01263 putative HTH-type transcriptional regulator YgaV low > 86
Klebsiella michiganensis M5al 0.76 BWI76_RS24300 NADH-dependent alcohol dehydrogenase 0.42 BWI76_RS21995 transcriptional regulator low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_3049 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 0.43 EX28DRAFT_2752 Predicted transcriptional regulators low > 76
Escherichia coli ECRC102 0.76 NIAGMN_16710 yqhD alcohol dehydrogenase 0.43 NIAGMN_18650 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECRC99 0.76 KEDOAH_09200 yqhD alcohol dehydrogenase 0.43 KEDOAH_07255 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECRC101 0.76 MCAODC_09460 yqhD alcohol dehydrogenase 0.43 MCAODC_11405 ygaV putative HTH-type transcriptional regulator YgaV low > 87
Escherichia coli ECRC100 0.76 OKFHMN_18945 yqhD alcohol dehydrogenase 0.43 OKFHMN_20885 ygaV putative HTH-type transcriptional regulator YgaV low > 80
Escherichia coli ECOR27 0.76 NOLOHH_10720 yqhD alcohol dehydrogenase 0.43 NOLOHH_12710 ygaV putative HTH-type transcriptional regulator YgaV low > 75
Escherichia coli ECRC98 0.76 JDDGAC_22580 yqhD alcohol dehydrogenase 0.43 JDDGAC_24545 ygaV putative HTH-type transcriptional regulator YgaV low > 86
Escherichia coli Nissle 1917 0.75 ECOLIN_RS17335 alcohol dehydrogenase 0.40 ECOLIN_RS14870 metalloregulator ArsR/SmtB family transcription factor — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3124 NADPH-dependent broad range aldehyde dehydrogenase YqhD 0.45 GFF1572 Transcriptional regulator, ArsR family low > 78
Acinetobacter radioresistens SK82 0.62 MPMX26_00884 Alcohol dehydrogenase YqhD 0.32 MPMX26_01494 Biofilm growth-associated repressor — —
Alteromonas macleodii MIT1002 0.60 MIT1002_02460 Alcohol dehydrogenase YqhD 0.38 MIT1002_02372 Biofilm growth-associated repressor low > 70
Acidovorax sp. GW101-3H11 0.59 Ac3H11_4515 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) 0.32 Ac3H11_2264 Transcriptional regulator, ArsR family low > 79
Shewanella sp. ANA-3 0.58 Shewana3_0261 iron-containing alcohol dehydrogenase (RefSeq) 0.45 Shewana3_3141 ArsR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO4469 alcohol dehydrogenase, iron-containing (NCBI ptt file) 0.45 SO3538 hlyU transcriptional regulator HlyU (NCBI ptt file) low > 76
Pontibacter actiniarum KMM 6156, DSM 19842 0.58 CA264_07375 NADH-dependent alcohol dehydrogenase 0.26 CA264_11085 transcriptional regulator low > 74
Shewanella loihica PV-4 0.52 Shew_0070 iron-containing alcohol dehydrogenase (RefSeq) 0.45 Shew_1095 ArsR family transcriptional regulator (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_17690 NADH-dependent alcohol dehydrogenase 0.41 CSW01_03555 transcriptional regulator low > 62

Not shown: 12 genomes with orthologs for HER17_RS19710 only; 26 genomes with orthologs for HER17_RS03345 only