Conservation of cofitness between HER17_RS13490 and HER17_RS00985 in Pectobacterium carotovorum WPP14

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS13490 NAD-dependent malic enzyme 1.0 HER17_RS00985 glutamate racemase 0.69 5
Dickeya dianthicola 67-19 0.89 HGI48_RS08645 NAD-dependent malic enzyme 0.81 HGI48_RS20375 glutamate racemase 0.86 2
Dickeya dianthicola ME23 0.89 DZA65_RS08935 NAD-dependent malic enzyme 0.81 DZA65_RS21420 glutamate racemase low > 75
Dickeya dadantii 3937 0.89 DDA3937_RS08480 NAD-dependent malic enzyme 0.82 DDA3937_RS01000 glutamate racemase low > 74
Serratia liquefaciens MT49 0.88 IAI46_07935 NAD-dependent malic enzyme 0.76 IAI46_24445 glutamate racemase — —
Rahnella sp. WP5 0.86 EX31_RS18665 NAD-dependent malic enzyme 0.72 EX31_RS14130 glutamate racemase — —
Pantoea sp. MT58 0.82 IAI47_06755 NAD-dependent malic enzyme 0.68 IAI47_00960 glutamate racemase — —
Erwinia tracheiphila SCR3 0.78 LU632_RS08550 NAD-dependent malic enzyme 0.68 LU632_RS19545 murI glutamate racemase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_02238 NAD-dependent malic enzyme 0.69 OHPLBJKB_04083 Glutamate racemase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2556 NAD-dependent malic enzyme (EC 1.1.1.38) 0.72 GFF2353 Glutamate racemase (EC 5.1.1.3) — —
Escherichia coli BL21 0.77 ECD_01437 malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme 0.69 ECD_03852 glutamate racemase — —
Escherichia coli BW25113 0.77 b1479 sfcA NAD-linked malate dehydrogenase (malic enzyme) (VIMSS) 0.69 b3967 murI glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS) — —
Escherichia coli ECRC62 0.77 BNILDI_17520 maeA malate dehydrogenase 0.69 BNILDI_05855 murI glutamate racemase — —
Escherichia coli ECOR27 0.77 NOLOHH_19035 maeA malate dehydrogenase 0.69 NOLOHH_05670 murI glutamate racemase — —
Escherichia fergusonii Becca 0.77 EFB2_02512 NAD-dependent malic enzyme 0.69 EFB2_04643 Glutamate racemase — —
Escherichia coli ECOR38 0.77 HEPCGN_26435 maeA malate dehydrogenase 0.69 HEPCGN_12180 murI glutamate racemase — —
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1103 Malic enzyme 0.69 EX28DRAFT_4430 glutamate racemase (EC 5.1.1.3) — —
Enterobacter sp. TBS_079 0.77 MPMX20_02369 NAD-dependent malic enzyme 0.68 MPMX20_04513 Glutamate racemase — —
Escherichia coli Nissle 1917 0.77 ECOLIN_RS08525 malate dehydrogenase 0.69 ECOLIN_RS22910 glutamate racemase — —
Klebsiella michiganensis M5al 0.77 BWI76_RS13830 NAD-dependent malic enzyme 0.72 BWI76_RS00895 glutamate racemase — —
Escherichia coli ECRC98 0.77 JDDGAC_03850 maeA malate dehydrogenase 0.69 JDDGAC_17150 murI glutamate racemase — —
Escherichia coli ECRC102 0.77 NIAGMN_25490 maeA malate dehydrogenase 0.69 NIAGMN_11275 murI glutamate racemase — —
Escherichia coli ECRC99 0.77 KEDOAH_27080 maeA malate dehydrogenase 0.69 KEDOAH_14635 murI glutamate racemase — —
Escherichia coli ECRC100 0.77 OKFHMN_01360 maeA malate dehydrogenase 0.69 OKFHMN_13525 murI glutamate racemase — —
Escherichia coli ECRC101 0.77 MCAODC_16580 maeA malate dehydrogenase 0.69 MCAODC_04025 murI glutamate racemase — —
Acinetobacter radioresistens SK82 0.72 MPMX26_00080 NAD-dependent malic enzyme 0.25 MPMX26_00293 Glutamate racemase — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_06015 NAD-dependent malic enzyme 0.39 CSW01_00800 glutamate racemase — —
Shewanella oneidensis MR-1 0.69 SO3855 sfcA malate oxidoreductase (NCBI ptt file) 0.39 SO0207 murI glutamate racemase (NCBI ptt file) — —
Shewanella loihica PV-4 0.68 Shew_2962 malate dehydrogenase (RefSeq) 0.35 Shew_0139 glutamate racemase (RefSeq) — —

Not shown: 9 genomes with orthologs for HER17_RS13490 only; 8 genomes with orthologs for HER17_RS00985 only